PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66089.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CPP

Protein Properties

Length: 793aa MW: 86067.4 Da PI: 7.2895

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	6.6e-16	498	535	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C+CkkskClk+YCeCfaag++C e C+C++C+Nk PKA66089.1 498 CKRCKCKKSKCLKLYCECFAAGVYCVEPCSCQGCFNKP 535 89**********************************96 PP
2	TCR	48	2.4e-15	582	620	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+C++CkN PKA66089.1 582 RHKNGCNCKKSNCLKKYCECYQGGVGCSFSCRCDSCKNA 620 5899**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence
MWDKCFESSV EIGVEIGENG HAGQEQDRRH ADLEDSPLFN FINSLSPIQP VKSVQSIQTF 60 QSQSFAAISS VFSSPQVSLQ KESRFLIRPS FPDSIKQGSS DSFDESIVYP GVSNGATPST 120 CKALVQENSN ITCSVNEATI DTPDGNSHQR DLSHVMQFDN GSPNHSTTPC YGIKLDFKLD 180 FSCTPELVQF IQYGTENISN KLSNEIGLKM KVQEGQKDCA SEYYLENLIS VDADDLLNVD 240 PTEAETSKME ERDSSISLNT QTAASLGLCP QNESHVSVVD CDGEADEQPG MGRSPKLLSG 300 TCHNQVVACK QNQKTDSGGK SHVSSGCKVD SQQLRGIRRR CLTFDVSGVS KRNLYNKSNV 360 PTSTTLPIKG KSSSDDQLLV SSKTPSTPPC ILPGIGLHLN ALASSSKDKT IPLENKVPGR 420 EIISKPCSLR PPPAEVGEKD ASKSLNLGQN PDPIGSVDLN HKVSNFVVSQ TPAPCIEEST 480 SPRKRRRKVE NGVGNEGCKR CKCKKSKCLK LYCECFAAGV YCVEPCSCQG CFNKPIHEET 540 VLATRKQIES RNPLAFAPKV IRPPEHDQDM GEDSNKTPGS SRHKNGCNCK KSNCLKKYCE 600 CYQGGVGCSF SCRCDSCKNA FGRKDGPDEI ECGREIVNGG KERLQSNEGQ ENANVPKPEH 660 GHVSEGALPL SPFPICRSLV KFPFLPGGKP SRSSILSQMS KKSENQLVQC NNEKCVENFQ 720 DDDTPEILRG NSSPSSTLKT ASPNGKRISP PHNGLGISPN RKGGRRLILK SIPSFPSLNG 780 EAPFESSTTG TNN

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence

MWDKCFESSV EIGVEIGENG HAGQEQDRRH ADLEDSPLFN FINSLSPIQP VKSVQSIQTF  60
QSQSFAAISS VFSSPQVSLQ KESRFLIRPS FPDSIKQGSS DSFDESIVYP GVSNGATPST  120
CKALVQENSN ITCSVNEATI DTPDGNSHQR DLSHVMQFDN GSPNHSTTPC YGIKLDFKLD  180
FSCTPELVQF IQYGTENISN KLSNEIGLKM KVQEGQKDCA SEYYLENLIS VDADDLLNVD  240
PTEAETSKME ERDSSISLNT QTAASLGLCP QNESHVSVVD CDGEADEQPG MGRSPKLLSG  300
TCHNQVVACK QNQKTDSGGK SHVSSGCKVD SQQLRGIRRR CLTFDVSGVS KRNLYNKSNV  360
PTSTTLPIKG KSSSDDQLLV SSKTPSTPPC ILPGIGLHLN ALASSSKDKT IPLENKVPGR  420
EIISKPCSLR PPPAEVGEKD ASKSLNLGQN PDPIGSVDLN HKVSNFVVSQ TPAPCIEEST  480
SPRKRRRKVE NGVGNEGCKR CKCKKSKCLK LYCECFAAGV YCVEPCSCQG CFNKPIHEET  540
VLATRKQIES RNPLAFAPKV IRPPEHDQDM GEDSNKTPGS SRHKNGCNCK KSNCLKKYCE  600
CYQGGVGCSF SCRCDSCKNA FGRKDGPDEI ECGREIVNGG KERLQSNEGQ ENANVPKPEH  660
GHVSEGALPL SPFPICRSLV KFPFLPGGKP SRSSILSQMS KKSENQLVQC NNEKCVENFQ  720
DDDTPEILRG NSSPSSTLKT ASPNGKRISP PHNGLGISPN RKGGRRLILK SIPSFPSLNG  780
EAPFESSTTG TNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	487	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-82	CPP family protein