PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65927.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 370aa MW: 40426.9 Da PI: 5.8022

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.6e-32	244	299	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a+++LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PKA65927.1 244 KERRCWSPELHRRFVNALQNLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 299 68****************************************************97 PP
2	Myb_DNA-binding	41.6	2.9e-13	246	297	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a + lGg t+k I + m g+t ++ks++qky+ PKA65927.1 246 RRCWSPELHRRFVNALQNLGGAqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 297 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGSLAPELAL DLKLFARNTI GCVLKQETTT AAGCRAAKLE DIVRRLEEER LKIEAFKREL 60 PLCMILLTDV IGGMKLELEQ FESGGRGLEE FVPIKSKVDG DDEGRLGKKS KMDWMNSALL 120 WSDYCSDESV GWRDASQEKK DGESDSRKDV EIPLFELGSG RAGGGAFQPF KAIPAPKKEE 180 GKLSISLPDL SLVPPEAPAD TGTDNLLSCS CPLPAIIPPT PVVGENLGSQ PHQRHQPPPP 240 PSKKERRCWS PELHRRFVNA LQNLGGAQVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHT 300 RRMPSSSTSQ ANKPVLMVGG LWVSQQDDCL TSQNSASQSA SPQGPLQLGL SVNAGDSCED 360 DGKSESYSWK

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGSLAPELAL DLKLFARNTI GCVLKQETTT AAGCRAAKLE DIVRRLEEER LKIEAFKREL  60
PLCMILLTDV IGGMKLELEQ FESGGRGLEE FVPIKSKVDG DDEGRLGKKS KMDWMNSALL  120
WSDYCSDESV GWRDASQEKK DGESDSRKDV EIPLFELGSG RAGGGAFQPF KAIPAPKKEE  180
GKLSISLPDL SLVPPEAPAD TGTDNLLSCS CPLPAIIPPT PVVGENLGSQ PHQRHQPPPP  240
PSKKERRCWS PELHRRFVNA LQNLGGAQVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHT  300
RRMPSSSTSQ ANKPVLMVGG LWVSQQDDCL TSQNSASQSA SPQGPLQLGL SVNAGDSCED  360
DGKSESYSWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-57	G2-like family protein