PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 18057.1 Da PI: 8.2003 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.4 | 1.3e-16 | 37 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p +kr r++lg++ ++ Aa+a++ a l+g PKA65833.1 37 HYRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVYLLRG 86 8******99.**********9...336*********************998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MEGREEDRRP AAAAVRTAAA EEAVDRQVGT APTPSKHYRG VRMRKWGKWV AEIREPNKRS 60 RIWLGSYSSP VAAARAYDTA VYLLRGRSAK LNFPEELAAD EDACAGGVDL SAASVRKKAA 120 EVGARVDALQ AGLMSAAQPP SPPAAAAAEA SSCRNPDLNQ QPSPENSDEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 4e-47 | ERF family protein |