PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 202aa MW: 23948.9 Da PI: 5.8564 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.7 | 2.3e-19 | 78 | 132 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+ +++++ e++++LA+kl+L rqV vWFqNrRa+ k PKA65783.1 78 RKKLRLTKEQSSLLEESFQAHKTLDPERKKDLAEKLSLRPRQVEVWFQNRRARTK 132 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 121.6 | 4.1e-39 | 78 | 165 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+keq++lLEesF+++++L+perK++la++L l+prqv+vWFqnrRARtk+kq+E+d+e L+r++++l+een+rL++eveeLr PKA65783.1 78 RKKLRLTKEQSSLLEESFQAHKTLDPERKKDLAEKLSLRPRQVEVWFQNRRARTKLKQTEVDCEILRRWCERLSEENRRLRREVEELR 165 69*************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MELGLGIGCG GFSGDRGGRR EPRPPVKLHL WFPSCPKPEE QEEEEEEEEE EEENTQLKDS 60 DDSEKRNDIE SHMIGRTRKK LRLTKEQSSL LEESFQAHKT LDPERKKDLA EKLSLRPRQV 120 EVWFQNRRAR TKLKQTEVDC EILRRWCERL SEENRRLRRE VEELRIHSEA EAIRVCPACQ 180 RAEGEEDEKI KKKKPRVFQV CN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 82 | RTRKKLR |
2 | 77 | 83 | TRKKLRL |
3 | 127 | 135 | RRARTKLKQ |
4 | 155 | 194 | RRLRREVEELRIHSEAEAIRVCPACQRAEGEEDEKIKKKK |
5 | 189 | 196 | KIKKKKPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 2e-31 | HD-ZIP family protein |