PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65667.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28964.8 Da PI: 7.7865 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50 | 7.2e-16 | 86 | 137 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PKA65667.1 86 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDVAAIKFRG 137 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MSFLYLHYCL IECILNSFLL LGGYDNEEKA ARAYDLAALK YWGVSATTNF PVGSYCIEME 60 EMQHMSKLEF IASIRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFAT 120 EEEAAEAYDV AAIKFRGSNA VTNFELSRYN LVAIANTDLP IGATAKKMKQ NLKSCNTQVL 180 CESSAMSMKP CCTESPPPLV QKLLQLHPSN SQSSSVHYYP DFYSQNLFWV GTENIIKSGN 240 QVNAGDYLDL MQVASSSSTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65510.1 | 8e-73 | AP2 family protein |