PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22625.9 Da PI: 8.4839 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.2 | 6.6e-21 | 82 | 131 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r r +lg+f+taeeAa+a++ a+ +++g PKA65639.1 82 KYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAARAYDLAAIEFRG 131 8********.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MDPATAFPSL LRLRLSPEQE TSIIVATLRH VISGHSAADA APEIPFPPAD ICLASRFKDE 60 AASSMVEVKV DGGRRRPKKK NKYRGVRQRP WGKWAAEIRD PRRAVRKWLG TFDTAEEAAR 120 AYDLAAIEFR GARAKLNFPF PDRNPAAAGG DLQGASAVAS PPSLSSQPVV LQPEAVKMEE 180 FWDVLQLQEL LPPDEVAMSD IWMLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G43160.1 | 7e-25 | ERF family protein |