PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65599.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 353aa MW: 38706.4 Da PI: 7.8619

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF++av+qLGG+ekAtPkti+++m+++gLtl+h+kSHLQkYRl PKA65599.1 34 KPRLKWTPELHERFIDAVNQLGGAEKATPKTIMRVMGIPGLTLYHLKSHLQKYRL 88 79****************************************************8 PP
2	Myb_DNA-binding	69.2	7.1e-22	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e+++dav+qlGg t+ktI+r mg g+tl+++ks++qky+ PKA65599.1 36 RLKWTPELHERFIDAVNQLGGAekaTPKTIMRVMGiPGLTLYHLKSHLQKYR 87 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MQDMNHHLAS ERNLFLQSGN GPGDSGLVLS TDAKPRLKWT PELHERFIDA VNQLGGAEKA 60 TPKTIMRVMG IPGLTLYHLK SHLQKYRLSR NLQAQANGGT AKNAVSPAVA SNRAPEGTGL 120 NIPTHGIEAI QISDAIQMQI EVQRRLHEQL EVQRRLQMQM ESQGKYLNSV LQKAQETLGK 180 QSMGGSSGIE AAKLQISELV SKASNECFSS ASHPLHPQAI QAADCSMDSC LSSCEGSQNT 240 NMIMRTYHGN SSSQGATQMQ ENFRLQQIQS AFFADFHGDR TLSQPGFNLS GNRTRKDEQN 300 PGFIASAVQS KCRKEPSFRL ACPPAAQLDL NALDEGSHAQ NCREFDLNSF SWS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MQDMNHHLAS ERNLFLQSGN GPGDSGLVLS TDAKPRLKWT PELHERFIDA VNQLGGAEKA  60
TPKTIMRVMG IPGLTLYHLK SHLQKYRLSR NLQAQANGGT AKNAVSPAVA SNRAPEGTGL  120
NIPTHGIEAI QISDAIQMQI EVQRRLHEQL EVQRRLQMQM ESQGKYLNSV LQKAQETLGK  180
QSMGGSSGIE AAKLQISELV SKASNECFSS ASHPLHPQAI QAADCSMDSC LSSCEGSQNT  240
NMIMRTYHGN SSSQGATQMQ ENFRLQQIQS AFFADFHGDR TLSQPGFNLS GNRTRKDEQN  300
PGFIASAVQS KCRKEPSFRL ACPPAAQLDL NALDEGSHAQ NCREFDLNSF SWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-102	G2-like family protein