PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64965.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CPP

Protein Properties

Length: 525aa MW: 57818.3 Da PI: 6.4032

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.5	6.3e-14	333	370	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C CkkskClk+YCeCfaag++C e C C++C+Nk PKA64965.1 333 CKNCCCKKSKCLKLYCECFAAGTYCVEPCLCQGCFNKP 370 89**********************************96 PP
2	TCR	51.5	2.1e-16	417	456	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kkgCnCkks+ClkkYCeC++ g+ Cs++C+Ce+C+N+ PKA64965.1 417 RHKKGCNCKKSNCLKKYCECYQGGVGCSSSCRCESCRNTF 456 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MHCTNGSPTH NDRPLCGIKF DFESDISSRT SELVQFVQDG LGNKNNLVSS EISLNVNIQE 60 DQKKNVASGC DWKNLASADD LIILDKEMIE KNHNSISLNT QPNASFSICI QNNPDDSLVD 120 NDGKAGEQPG MNRAAKLLSD NSFHQEKFSE QNQKADAGVT ACVYLGCKIN SQPARGMRRR 180 CLVFEASGNS ERNLRNDSTA IPPITLLTKE RPTSDDQLLA SSNPCLLPGI GLHLNALASS 240 SKDKLYFPEN KIPVREIICK PCSGCPFPPA EVGEKSKIFE LEQTTDPLGR EAEDFQVVHS 300 DVLQTPAPPV EESTCPRKKS RRKIGNGSDS EGCKNCCCKK SKCLKLYCEC FAAGTYCVEP 360 CLCQGCFNKP IHEEIVLATR KQIESRNPLA FAPKVIRTFE DGQDMEEETN KTPASARHKK 420 GCNCKKSNCL KKYCECYQGG VGCSSSCRCE SCRNTFGRKD GVDEVECDGE IVDCAKVKLN 480 EGQNNADIPK IEGCHLSEGT LAKTLFLTSR LRSFFCLSDS PYSFY

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MHCTNGSPTH NDRPLCGIKF DFESDISSRT SELVQFVQDG LGNKNNLVSS EISLNVNIQE  60
DQKKNVASGC DWKNLASADD LIILDKEMIE KNHNSISLNT QPNASFSICI QNNPDDSLVD  120
NDGKAGEQPG MNRAAKLLSD NSFHQEKFSE QNQKADAGVT ACVYLGCKIN SQPARGMRRR  180
CLVFEASGNS ERNLRNDSTA IPPITLLTKE RPTSDDQLLA SSNPCLLPGI GLHLNALASS  240
SKDKLYFPEN KIPVREIICK PCSGCPFPPA EVGEKSKIFE LEQTTDPLGR EAEDFQVVHS  300
DVLQTPAPPV EESTCPRKKS RRKIGNGSDS EGCKNCCCKK SKCLKLYCEC FAAGTYCVEP  360
CLCQGCFNKP IHEEIVLATR KQIESRNPLA FAPKVIRTFE DGQDMEEETN KTPASARHKK  420
GCNCKKSNCL KKYCECYQGG VGCSSSCRCE SCRNTFGRKD GVDEVECDGE IVDCAKVKLN  480
EGQNNADIPK IEGCHLSEGT LAKTLFLTSR LRSFFCLSDS PYSFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-57	CPP family protein