PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64568.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 2084aa MW: 232060 Da PI: 6.5944

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.2	4.9e-07	615	661	7	53
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++k l +Le+++++++ p+ +++ + + ++L+ ++V+ WF +R PKA64568.1 615 LKKVHLATLEKVYARTKRPTNAMISSIVHVTNLPWKKVTKWFEDKRL 661 5677899************************************9995 PP
2	bZIP_1	44.3	3.9e-14	723	784	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 eke kr +r+ +NR++A+ R+RKka++ Le+kvk Le +N++L ++l++l++e l++ PKA64568.1 723 EKEHKRLKRLLRNRVSAQQARERKKAYLNDLETKVKDLEVKNTELEERLSTLQNENHMLRQI 784 799****************************************************9988775 PP

Sequence ? help Back to Top
Protein Sequence Length: 2084 aa Download sequence
MAALLRRISR ATAPLGLGNA YKEQPKWDRG RRISLGTAAA VSSGAAFYFF CSPSTLAYLD 60 PQPEETTEKV ALNPEKWLEF KLQETAKVSH NTKLYRFTFD PAAKLGLDIA SCIITRTCGF 120 RTAIGEESEG RKKYVIRPYT PISDPDSKGY FDLLIKAYPE GKMSQHFASL KPGDVMEVKG 180 PIEKLRYSPN MKKKIGMIAG GTGITPMLQV IKAIVKNPDD KTQVSLLYGN LSPDDILLKA 240 ELDRLAATYP NFKVFYTVDK PNKTWRGGSG IISEDMVVKA LPGPEEDTLI LVCGPPGMMN 300 HISGDKAQDR SQGVLSGVLK ELGYSEEKNF GLKSPFEAGG EFVESLAVMA FYTSNSSLVS 360 VRDLSFRFVP LCPSSLFVEG AAKHPLAFFR CPTQCSSSAV VFYCQRKKVS SISLTQPCRS 420 KKIAQNVKGE EDEIDEDAFE ALFTQLEEDL KNDGNLSDGD EDDITEEDLD RLQQELDEAL 480 GNEESDDFLE DSPSKSENMD DHEDDEEEIQ PKLKNWQLRR LAHALKIGRR KTSIKSLSAE 540 LGLNRAYVLE LLREPPLKLL MMRATIANDV KETLEPVKQP IESPSNCDVR IAQTEPKAET 600 PVHVMQTRWS MQKRLKKVHL ATLEKVYART KRPTNAMISS IVHVTNLPWK KVTKWFEDKR 660 LEDGVFERLA ESDEEMRRVP ELGGEAAGPS NSDPADDGRA AAIWQLSPAQ PANQRKRVRN 720 PVEKEHKRLK RLLRNRVSAQ QARERKKAYL NDLETKVKDL EVKNTELEER LSTLQNENHM 780 LRQILKNTAL GKKGLASSSS AADSSSSGLF VSYPANFLLL GYFLKMPVEV KDANHLQEPL 840 LSSRDDSSPY SHAAFPSLLT FSWVNPLLSL GRQTRIDYED IPPLAIEDSV HSSFSNFREK 900 LQFDGSGGPG NRDVKCAFKL AKALIGSVRR DLLLSVVFAV LSTSASFVGP YLIDAFVQYL 960 HTPHDHSANG YVIVSIFLFT KLVECLSQRH WFFRAQKFGT KAHATLVAKI YEKGLALSNI 1020 SSQYTGCGEI VNLMSVDAER IGNFSWYLID FCLIPFQVGL ALVILYLKLG LASLVALAAI 1080 FLVMVTNIPF STLEQNFQEK MMESKDRRMK ATSEVLRNMR VLKFYSWEMG FLSRIIKLRE 1140 DEMCWLRKFL YTEVIVTFVY WGAPIFVSLV TFSACVLMGT PLESGKVLSA LATFAILKDP 1200 IYNLPDIISL FAQTLVSVGR ISTFLSLEER QPNAVEKVNE GNSEFAVEIA IGNFSWDPSS 1260 GILTLKDVDL RVLHGMKVAV CGAVGSGKSS FLSCILGEIP KVSGTVRICG STAYVAQSPW 1320 IQSGTIEDNI LFGKEMDREL YEGVLDACAL KKDLEILPFR DRTVIGERGI YLSGGQKQRI 1380 QIARALYQDC DVYLLDDPFS AVDAQTGNHL FKDCLLGHLA SKTVIYVTHQ VEFLPSSDLI 1440 LVMKNGVIVQ AGKYNDILIE GTELAKLVGA HKSALCSIDS STKTLPVSAS KDRCLYQTLG 1500 GSSNLASKSQ WEEFQKDADL RDKNDSQARQ LVEEEERHRG KVVTFYCNYL MALYKGAFVP 1560 FILLSQIIFQ VLQIGSNYWM TMAASTTEDA RSLVSGSLLI LVYAALALGS CLFVFIRAAL 1620 LALAGYKTAQ LFFHKMHRCA STDQSAVDVT VPFQMGLLAS AIIQLLGAIV VMSQVAWETY 1680 YIVTARELTR LVGVRNAPII QQFAETISGL ATIRCFDKQL YFMSTNLQLI DAYLKPKFYN 1740 AAAMEWLCFR LDLLSSIIFA FCLAFLISLP PGFINPGVAG LAVTYGLTLS SLIAWVVWNL 1800 CYLENEIISV ERILQYTCIP AEAPLIVEEN RPTISWPNHG EVIICNLLIR YASHLPVVLR 1860 DLTCTLYGGT RTGIVGRTGS GKSTFVQALF RIVEPAAGKI IIDDIDISTI GLLDLRTRLS 1920 IIPQEPTMFE GTVRSNLDPL GEYTDDQIWE ALDKCQLGVE IRNKAEKLDS LVVENGENWS 1980 IGQRQLFCLG RVLLRKSRIL VLDEATASVD PATDSLIQIA LKEYFPYSTI ITIAHRIATV 2040 LDSDMVLVFD NGRAVEHATP GNLLENNGSA FLRLVKEYTS RMII

Sequence ? help Back to Top

Protein Sequence Length: 2084 aa Download sequence

MAALLRRISR ATAPLGLGNA YKEQPKWDRG RRISLGTAAA VSSGAAFYFF CSPSTLAYLD  60
PQPEETTEKV ALNPEKWLEF KLQETAKVSH NTKLYRFTFD PAAKLGLDIA SCIITRTCGF  120
RTAIGEESEG RKKYVIRPYT PISDPDSKGY FDLLIKAYPE GKMSQHFASL KPGDVMEVKG  180
PIEKLRYSPN MKKKIGMIAG GTGITPMLQV IKAIVKNPDD KTQVSLLYGN LSPDDILLKA  240
ELDRLAATYP NFKVFYTVDK PNKTWRGGSG IISEDMVVKA LPGPEEDTLI LVCGPPGMMN  300
HISGDKAQDR SQGVLSGVLK ELGYSEEKNF GLKSPFEAGG EFVESLAVMA FYTSNSSLVS  360
VRDLSFRFVP LCPSSLFVEG AAKHPLAFFR CPTQCSSSAV VFYCQRKKVS SISLTQPCRS  420
KKIAQNVKGE EDEIDEDAFE ALFTQLEEDL KNDGNLSDGD EDDITEEDLD RLQQELDEAL  480
GNEESDDFLE DSPSKSENMD DHEDDEEEIQ PKLKNWQLRR LAHALKIGRR KTSIKSLSAE  540
LGLNRAYVLE LLREPPLKLL MMRATIANDV KETLEPVKQP IESPSNCDVR IAQTEPKAET  600
PVHVMQTRWS MQKRLKKVHL ATLEKVYART KRPTNAMISS IVHVTNLPWK KVTKWFEDKR  660
LEDGVFERLA ESDEEMRRVP ELGGEAAGPS NSDPADDGRA AAIWQLSPAQ PANQRKRVRN  720
PVEKEHKRLK RLLRNRVSAQ QARERKKAYL NDLETKVKDL EVKNTELEER LSTLQNENHM  780
LRQILKNTAL GKKGLASSSS AADSSSSGLF VSYPANFLLL GYFLKMPVEV KDANHLQEPL  840
LSSRDDSSPY SHAAFPSLLT FSWVNPLLSL GRQTRIDYED IPPLAIEDSV HSSFSNFREK  900
LQFDGSGGPG NRDVKCAFKL AKALIGSVRR DLLLSVVFAV LSTSASFVGP YLIDAFVQYL  960
HTPHDHSANG YVIVSIFLFT KLVECLSQRH WFFRAQKFGT KAHATLVAKI YEKGLALSNI  1020
SSQYTGCGEI VNLMSVDAER IGNFSWYLID FCLIPFQVGL ALVILYLKLG LASLVALAAI  1080
FLVMVTNIPF STLEQNFQEK MMESKDRRMK ATSEVLRNMR VLKFYSWEMG FLSRIIKLRE  1140
DEMCWLRKFL YTEVIVTFVY WGAPIFVSLV TFSACVLMGT PLESGKVLSA LATFAILKDP  1200
IYNLPDIISL FAQTLVSVGR ISTFLSLEER QPNAVEKVNE GNSEFAVEIA IGNFSWDPSS  1260
GILTLKDVDL RVLHGMKVAV CGAVGSGKSS FLSCILGEIP KVSGTVRICG STAYVAQSPW  1320
IQSGTIEDNI LFGKEMDREL YEGVLDACAL KKDLEILPFR DRTVIGERGI YLSGGQKQRI  1380
QIARALYQDC DVYLLDDPFS AVDAQTGNHL FKDCLLGHLA SKTVIYVTHQ VEFLPSSDLI  1440
LVMKNGVIVQ AGKYNDILIE GTELAKLVGA HKSALCSIDS STKTLPVSAS KDRCLYQTLG  1500
GSSNLASKSQ WEEFQKDADL RDKNDSQARQ LVEEEERHRG KVVTFYCNYL MALYKGAFVP  1560
FILLSQIIFQ VLQIGSNYWM TMAASTTEDA RSLVSGSLLI LVYAALALGS CLFVFIRAAL  1620
LALAGYKTAQ LFFHKMHRCA STDQSAVDVT VPFQMGLLAS AIIQLLGAIV VMSQVAWETY  1680
YIVTARELTR LVGVRNAPII QQFAETISGL ATIRCFDKQL YFMSTNLQLI DAYLKPKFYN  1740
AAAMEWLCFR LDLLSSIIFA FCLAFLISLP PGFINPGVAG LAVTYGLTLS SLIAWVVWNL  1800
CYLENEIISV ERILQYTCIP AEAPLIVEEN RPTISWPNHG EVIICNLLIR YASHLPVVLR  1860
DLTCTLYGGT RTGIVGRTGS GKSTFVQALF RIVEPAAGKI IIDDIDISTI GLLDLRTRLS  1920
IIPQEPTMFE GTVRSNLDPL GEYTDDQIWE ALDKCQLGVE IRNKAEKLDS LVVENGENWS  1980
IGQRQLFCLG RVLLRKSRIL VLDEATASVD PATDSLIQIA LKEYFPYSTI ITIAHRIATV  2040
LDSDMVLVFD NGRAVEHATP GNLLENNGSA FLRLVKEYTS RMII

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	613	654	KRLKKVHLATLEKVYARTKRPTNAMISSIVHVTNLPWKKVTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	1e-46	HB-other family protein