PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA64545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 475aa MW: 50999 Da PI: 4.6574 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 393.4 | 2.4e-120 | 48 | 411 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgd..pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 lv+lL++cA+ ++ gd la +++++++ l g + ++a +f+eAL +rl + + pps++++ +e +++f+e+ P+lkf+h+t PKA64545.1 48 LVHLLVTCADSIQRGDRLLAGTMIEEMRLLMPRVGAsfGIGKVAGFFVEALDRRLCS------DLTPPSSSQP--PEEDEILYHYFYEAGPYLKFAHFT 138 68****************************99999623689***************9......4445555543..3444457799************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 aNqaIlea++g++r+H++Df+++qGlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A+++gvpf f+ +va l+d+++++L PKA64545.1 139 ANQAILEAFNGHDRLHVVDFSLMQGLQWPALIQALALRPGGPPFLRLTGIGPPSPDGSDKLREVGLRLADLASSVGVPFAFRGVVAAGLDDVQPWML-- 235 *************************************************************************************************.. PP GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...eerikvErellgr 292 EalaVn+vlqlhrl+ e++s +d+vL+ v +l+P vv++veqeadhn++ Fl+rf+eal yys+lfdslea+ + s + +++ +++l++ PKA64545.1 236 ---EALAVNSVLQLHRLVGEPASPGP-IDSVLSWVGRLRPSVVTLVEQEADHNKPAFLDRFTEALFYYSTLFDSLEAGSGCGSgpaADLASLAEVYLKK 330 ...***************88777666.************************************************999888887777888999****** PP GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 ei n+v+cegaer+erhe l++Wr+r++++G+ pv+l+++a qa++ll ++++gy+vee +g+l+lgW++r+L+s+SaW PKA64545.1 331 EIYNIVCCEGAERVERHEPLASWRSRMGRSGLLPVHLGSNAFRQASMLLMLFSGEGYSVEEVDGCLTLGWHGRALISASAW 411 ********************************************************************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MIAAAAAGIP PEFLCSDAVH YNPSDLAAWV DSVAMLTDLP PEDAGIRLVH LLVTCADSIQ 60 RGDRLLAGTM IEEMRLLMPR VGASFGIGKV AGFFVEALDR RLCSDLTPPS SSQPPEEDEI 120 LYHYFYEAGP YLKFAHFTAN QAILEAFNGH DRLHVVDFSL MQGLQWPALI QALALRPGGP 180 PFLRLTGIGP PSPDGSDKLR EVGLRLADLA SSVGVPFAFR GVVAAGLDDV QPWMLEALAV 240 NSVLQLHRLV GEPASPGPID SVLSWVGRLR PSVVTLVEQE ADHNKPAFLD RFTEALFYYS 300 TLFDSLEAGS GCGSGPAADL ASLAEVYLKK EIYNIVCCEG AERVERHEPL ASWRSRMGRS 360 GLLPVHLGSN AFRQASMLLM LFSGEGYSVE EVDGCLTLGW HGRALISASA WVVSDDTPPP 420 PPAPPVAGNV ILNYDDSRGF RFGESVTIGS SSSSSNHSIT GGVGSQREQC VNVNC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 1e-135 | GRAS family protein |