PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64542.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 469aa MW: 50881.2 Da PI: 6.4565

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.1	5.3e-30	250	304	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PKA64542.1 250 KARRCWSPDLHRRFVNALQILGGSQ-ATPKQIRELMKVDGLTNDEVKSHLQKYRLH 304 68*****************9987.**************************97 PP
2	Myb_DNA-binding	39.9	9.8e-13	252	302	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a + lGg t+k I + m g+t ++ks++qky+ PKA64542.1 252 RRCWSPDLHRRFVNALQILGGSqaTPKQIRELMKvDGLTNDEVKSHLQKYR 302 568***************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MASPSELSLD FKPNSYSMIQ KAFSEQADQQ TQKLQEFLSR LEEERFKIEA FKRELPLCMQ 60 LLNNAVESYR VQLEEYRKRR GTEPMLEEFI PLKNMSIEEM EKPANPTVEK ASWMVSAQLW 120 SSPAADSATA ARQPPPPAAA LPALKESVEH CFGLDSKPRN GGAFHPFCKE KNKDSPPPSS 180 VHPELALASP DNEMNDKKCP ENESGARGSR TRESCSKNVT MAVDHHQQAA SGKGGNGVAA 240 DGAQPATQRK ARRCWSPDLH RRFVNALQIL GGSQATPKQI RELMKVDGLT NDEVKSHLQK 300 YRLHTRRPMA VAPAAAAAAP QLVVLGGIWV PPEYATSAAA AAAAAAAAGP ALYGAHPTPA 360 HYCPSPPAPH DYYQTPLPPT MSPVGAQLHG HLPPLQLGGG TVNSGRYKSR KGSPESELRS 420 SGERSESIEE GQEEESEVEA DVEEEKAEEK GMVARGGAKV EDGAVELKF

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MASPSELSLD FKPNSYSMIQ KAFSEQADQQ TQKLQEFLSR LEEERFKIEA FKRELPLCMQ  60
LLNNAVESYR VQLEEYRKRR GTEPMLEEFI PLKNMSIEEM EKPANPTVEK ASWMVSAQLW  120
SSPAADSATA ARQPPPPAAA LPALKESVEH CFGLDSKPRN GGAFHPFCKE KNKDSPPPSS  180
VHPELALASP DNEMNDKKCP ENESGARGSR TRESCSKNVT MAVDHHQQAA SGKGGNGVAA  240
DGAQPATQRK ARRCWSPDLH RRFVNALQIL GGSQATPKQI RELMKVDGLT NDEVKSHLQK  300
YRLHTRRPMA VAPAAAAAAP QLVVLGGIWV PPEYATSAAA AAAAAAAAGP ALYGAHPTPA  360
HYCPSPPAPH DYYQTPLPPT MSPVGAQLHG HLPPLQLGGG TVNSGRYKSR KGSPESELRS  420
SGERSESIEE GQEEESEVEA DVEEEKAEEK GMVARGGAKV EDGAVELKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-93	G2-like family protein