PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64513.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 366aa MW: 39462.3 Da PI: 8.6444

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	2.9e-28	182	238	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRla 56 k r++W+p LH++F++a+eqLGGs+ AtPk+i+elmkv+gLt+++vkSHLQ k+Rl+ PKA64513.1 182 KHRRCWSPGLHRKFLHALEQLGGSQAATPKQIRELMKVDGLTNDEVKSHLQqKFRLH 238 68************************************************6499986 PP
2	Myb_DNA-binding	31.7	3.6e-10	184	233	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r W++ ++ ++++a +qlGg t+k I + m g+t ++ks++q+ PKA64513.1 184 RRCWSPGLHRKFLHALEQLGGSqaaTPKQIRELMKvDGLTNDEVKSHLQQ 233 568***************99************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MALAEGNRRR HGRDYVEALE EERRKIQMFS RELPLCLQLV TEAIESCRRR MAGEVPVLEE 60 FIPLRPSFSS SENGDRKGVS NSKPDWLRSV QLWGPAAVEE PPTEGGGTLR KPVAVNARKV 120 GGAFQPFERE KITPFAPGLS PAAAISSTTT APGSIGDKMN GCGEEKEKED GRSQPPPPPH 180 RKHRRCWSPG LHRKFLHALE QLGGSQAATP KQIRELMKVD GLTNDEVKSH LQQKFRLHTR 240 RPVTTVQSSS SSSSPQTPPQ FVVVGGIWVP PPDYVAAVTA AAAVTASAAP ALPPKGSSPA 300 ADNQHSPVPL QAFQLGLVKE PFNSPKSTIK DHDNDDEDSL ADDAATKSNS STTSSSSQTT 360 TASPPL

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MALAEGNRRR HGRDYVEALE EERRKIQMFS RELPLCLQLV TEAIESCRRR MAGEVPVLEE  60
FIPLRPSFSS SENGDRKGVS NSKPDWLRSV QLWGPAAVEE PPTEGGGTLR KPVAVNARKV  120
GGAFQPFERE KITPFAPGLS PAAAISSTTT APGSIGDKMN GCGEEKEKED GRSQPPPPPH  180
RKHRRCWSPG LHRKFLHALE QLGGSQAATP KQIRELMKVD GLTNDEVKSH LQQKFRLHTR  240
RPVTTVQSSS SSSSPQTPPQ FVVVGGIWVP PPDYVAAVTA AAAVTASAAP ALPPKGSSPA  300
ADNQHSPVPL QAFQLGLVKE PFNSPKSTIK DHDNDDEDSL ADDAATKSNS STTSSSSQTT  360
TASPPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-60	G2-like family protein