PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64455.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 367aa MW: 42226.5 Da PI: 6.3713

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.8	1.9e-31	92	145	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+++AtPk +l++m+v gL+++hvkSHLQ+YR+ PKA64455.1 92 PRLRWTPELHLSFVRAVERLGGQDRATPKLVLQMMNVRGLSIAHVKSHLQMYRS 145 8****************************************************7 PP
2	Myb_DNA-binding	50.7	4.2e-16	93	144	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ PKA64455.1 93 RLRWTPELHLSFVRAVERLGGQdraTPKLVLQMMNvRGLSIAHVKSHLQMYR 144 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MADRFTTENP ISVNGKKKKE EIMRDKRLVE VEVVEITDDE EEKSEKRRRA EPELNEEEED 60 GDGRSSYNSG ETAARSPPPP ASVRNYVRSK VPRLRWTPEL HLSFVRAVER LGGQDRATPK 120 LVLQMMNVRG LSIAHVKSHL QMYRSKKLDD SGQERSTFSP ALLRESFHEM ICKQRAARFS 180 HENDRFYSLL HTLQKPLHSH ENLIFRPQEY PARRDQAHPR WPLARGSFDW IEGATDQLYM 240 MNNLNPFCFQ EPIIEFEEPS KKTVTELDEE EELRENKRTR LSRCGSGRIL DLQLSLTPSS 300 ADDHQNEEES QLSLSLSPPS SREMGFRKIQ EGIMGAEIDF LKTGVSSKKS TLGLSTLDLT 360 MSIKALE

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MADRFTTENP ISVNGKKKKE EIMRDKRLVE VEVVEITDDE EEKSEKRRRA EPELNEEEED  60
GDGRSSYNSG ETAARSPPPP ASVRNYVRSK VPRLRWTPEL HLSFVRAVER LGGQDRATPK  120
LVLQMMNVRG LSIAHVKSHL QMYRSKKLDD SGQERSTFSP ALLRESFHEM ICKQRAARFS  180
HENDRFYSLL HTLQKPLHSH ENLIFRPQEY PARRDQAHPR WPLARGSFDW IEGATDQLYM  240
MNNLNPFCFQ EPIIEFEEPS KKTVTELDEE EELRENKRTR LSRCGSGRIL DLQLSLTPSS  300
ADDHQNEEES QLSLSLSPPS SREMGFRKIQ EGIMGAEIDF LKTGVSSKKS TLGLSTLDLT  360
MSIKALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-37	G2-like family protein