PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64021.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 364aa    MW: 40976.8 Da    PI: 4.6616
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2673.7e-21116165255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++G+r+++ +g+W+AeIrdp++     r++lg+f+t+eeAa+a++aa++k++g
  PKA64021.1 116 QFRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEEAARAYDAAARKIRG 165
                 69*******.**********954...3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MCGGAIISNF IPPVRSRRVT ADYLWPDLVK KKKKGGRRIK VTDFDDDFEA DFREFEDDPD  60
EDEPAEVDED EEVIEIKPFG FRPKEAPISR EGVVNLKHPQ FDGPADKASK RKRKNQFRGI  120
RQRPWGKWAA EIRDPRKGER VWLGTFDTPE EAARAYDAAA RKIRGKKAKV NFPDEAPRAT  180
QKHPAKPSAP KTLKQNPSEE LNFNQSFDYL SDMDYGLYSA APTSFPELKT FSPSEGVVNF  240
HSEQESNSLN CSGFGWETEV NNPEIASLPP LIAEDVKSVY VEESAPQKKL KNNYGEAVSA  300
DQGAPMKLSE ELSVFEPYMK FMPFLEGGSD VSFDTLLGAD ITQDGISSMD LWSFEDMPIS  360
GNIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.38e-46ERF family protein