PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA64020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 267aa MW: 29246.4 Da PI: 10.3687 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.9 | 5e-13 | 126 | 170 | 2 | 50 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 +++GVr ++ +grW AeI++p++ + r++lg+f t+ +A +a+ +a+ PKA64020.1 126 KHRGVRLRP-SGRWSAEIWCPVN---KERIWLGTFPTESKAVEAYRRAA 170 89*******.7*********653...5**********88*****99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MVLMQRFFGF GSKDRLSSLF ELLLLLPLLL LVLLHPFQEK MGKPRLRTAK VKPLKKPTRR 60 LFRIVYNDPD ATESSGDEGK GSGSGGDVSR PKRKVQEFPF AARPPKNVAL ASTRIASSSS 120 LSGKRKHRGV RLRPSGRWSA EIWCPVNKER IWLGTFPTES KAVEAYRRAA PRRLQDKKGA 180 CCSAGSSGDG FLSTSLPPLD ELDPSSLNGQ DGGRTGGIET VSLQDAFGLG LDSFFLQGEL 240 GGEFWPGSVS LPHEWASTSE IEEIFAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67010.1 | 6e-11 | ERF family protein |