PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA63584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19176.4 Da PI: 10.3407 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 20 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +gr++AeIrd ++ ++r++lg+f++ae Aa+a++ a+++l+g PKA63584.1 20 THFRGVRRRP-WGRFAAEIRDpWK----KARVWLGTFDSAEAAARAYDCAARALRG 70 589*******.**********883....5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MRKRRSTEAA GDPPQTGTET HFRGVRRRPW GRFAAEIRDP WKKARVWLGT FDSAEAAARA 60 YDCAARALRG PNAKTNFAGA GPPARPTSSS MSSTVESSSG PHSLVVRRPS SCLRHRENPA 120 PPRVLASDDD CHSDCGSSSS VVDDRNLAPK VRRPLPFDLN LLPPPEDDLQ STALHL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1 | 6 | MRKRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 8e-21 | ERF family protein |