PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA63552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 146aa MW: 15739.9 Da PI: 10.6474 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.9 | 4.4e-17 | 12 | 61 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+WvAeIr+p +kr r +lg++ ta Aa+a++ a +l+g PKA63552.1 12 PYRGVRMRK-WGKWVAEIREP---NKRSRLWLGSYSTAVAAARAYDTAVFYLRG 61 59*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MDTSPEKHPR RPYRGVRMRK WGKWVAEIRE PNKRSRLWLG SYSTAVAAAR AYDTAVFYLR 60 GRSARLNFPD DPPASCAAGA GGELSAACIR KRAAEVGASV DALLVQKKTR AAAPATMAPV 120 AAFERPDLNR QPSPDAAAAY ATGPDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 2e-34 | ERF family protein |