PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA63534.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 133aa MW: 14776.8 Da PI: 8.0692 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.5 | 5.5e-09 | 52 | 99 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+riN+++ L++l+P + k + a +L + ++Y++sLq PKA63534.1 52 SHSLAERVRRERINERMRCLQDLVPGC----YKTMGMARMLDEIINYVQSLQ 99 8*************************9....35599999*********9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MGPFEGFDHR EVPVGGGSPS SSEGCGMGNS KEGEKPKKVV HVRARRGQAT DSHSLAERVR 60 RERINERMRC LQDLVPGCYK TMGMARMLDE IINYVQSLQN QIEFLSMKLS AATSYGFNLD 120 LEDNSAVKNV IIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 1e-37 | bHLH family protein |