PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63230.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 760aa    MW: 86468.4 Da    PI: 4.8877
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS372.55.6e-1143867562374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL++cA+ v++gd+++  ++L ++++++sp+gd+ qRla+yf+++L+arla+++se++++l++ +++    +++l+a++l+  +sP+ k+s+   Nq
  PKA63230.1 386 HSLLMQCAQTVAAGDHRRGYEILRQIRQHSSPHGDACQRLAHYFANGLEARLAGTGSEIFHSLTSMRKT---AADVLKAYQLYLAASPFKKVSYHFSNQ 481
                 689*********************************************************999888887...8************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Ile +e+++rvHi+Df+i  G+QWp +++ L+sRp+gpp++RiTg++ p++g   +e++eetg+rLa++Ae++gvpfe++  +a++le++++e+Lr++
  PKA63230.1 482 TILETIEKATRVHILDFGIYFGFQWPIFFKMLSSRPGGPPKIRITGIDVPQPGfrPAERIEETGRRLADYAERFGVPFEYHS-LASKLEQVKVEDLRLD 579
                 ****************************************************9*****************************.599************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+Vn+v++l +l des+ ++ +rd++L+ +++l+P v+v + ++ +++++ Fl+rf eal+++sa+fd+le+++pre+e+r+ vEr + gr++ n
  PKA63230.1 580 EEEMLVVNCVFRLTSLGDESMGVDCPRDKFLRNIRKLNPAVFVNIISNGNYGAPFFLTRFREALYHFSAMFDMLEMTVPREEEQRMLVERDICGRAAIN 678
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v++ceg er+er e++++ + r  +aG++++p+s++ +++a+  ++ ++ + ++++e+  +l++gW++r  v++SaW+
  PKA63230.1 679 VISCEGPERVERPESYKQVQVRCLRAGLEQLPISHEFTEKARGAVKAHYHKDFSLDEDGRWLLQGWRGRIFVALSAWK 756
                 *************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MRSHGIELVD LFHVMVTREV ISCHDSRIEE GKGFRFILGL MLKNSMNDVT IEDFEYSSYL  60
SMDDFLVQEE ELRANPILGD PETFEEQQIF AEPQISSSQS QEVDSQDSSE FLSDLVLEFI  120
DQMLMEEEMG DKFDTLLSHP DLEATEKPFY EIIGEKYPPS PDRPPLYSSP SPDSSDFHRS  180
NSDYGRGADG CAGISSLADS GDAIPEIADH QLQSQIYSSD AAGLLDGLEG PSDELTDLFF  240
RTIPASQFEK GFEEAMKFLP SEDRLIIGVD LPQEPNRSLD SIEVKEEDGR GIRQKSRHDD  300
GFDLEEQRSR KQSAVSHEEP DFPSEMFDRV FLCTAEKFPK VISDIRETMN SKAGKNSEST  360
EPKEPPGNGR KPRRKKQPKK EVVDLHSLLM QCAQTVAAGD HRRGYEILRQ IRQHSSPHGD  420
ACQRLAHYFA NGLEARLAGT GSEIFHSLTS MRKTAADVLK AYQLYLAASP FKKVSYHFSN  480
QTILETIEKA TRVHILDFGI YFGFQWPIFF KMLSSRPGGP PKIRITGIDV PQPGFRPAER  540
IEETGRRLAD YAERFGVPFE YHSLASKLEQ VKVEDLRLDE EEMLVVNCVF RLTSLGDESM  600
GVDCPRDKFL RNIRKLNPAV FVNIISNGNY GAPFFLTRFR EALYHFSAMF DMLEMTVPRE  660
EEQRMLVERD ICGRAAINVI SCEGPERVER PESYKQVQVR CLRAGLEQLP ISHEFTEKAR  720
GAVKAHYHKD FSLDEDGRWL LQGWRGRIFV ALSAWKPRGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-163GRAS family protein