PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA63144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 661aa MW: 74918 Da PI: 6.6191 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 378.3 | 9.8e-116 | 288 | 657 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 +lLl+cA+ v++gd ++ +lL++++++++p+gd+ qR+a+yf+ +L+arla+++se+y++l +++++ +++l+a++l+ ++P+ k+s+ aNq+ PKA63144.1 288 TLLLHCAQTVAAGDSRRGYELLKKIRQHSTPHGDAPQRVAHYFADGLEARLAGTGSEIYHSLVAKRKT---AADVLKAYQLYLAACPFKKISYHFANQT 383 79************************************************************999998...9*************************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 Ile +e+++rvHi+Df+i G+QWp +++ L++Rp+gpp+lRiTg++ p++g e++eetg+rLa +A+++gvpfe+++ va+++e++++e+L +k+ PKA63144.1 384 ILETIEKATRVHIVDFGIYFGFQWPVFIKLLSQRPGGPPKLRITGIDFPQPGfrPLEMIEETGRRLAGYAKRFGVPFEYQA-VASKFEEIKIEDLCIKE 481 ***************************************************99999*************************.7**************** PP GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297 +E+l+V++vl+lh+l de+v ++ +rd+vL+++++l+P ++v v +++++ F++rf eal+++salfd+le+++pre+ +r vEr l gr + nv PKA63144.1 482 DEMLVVSCVLRLHNLADETVVVDCPRDKVLRTIRELNPALFVNVVISGSYGAPFFVTRFREALYHFSALFDMLETNVPREDAQRLLVERNLYGRFAINV 580 *************************************************************************************************** PP GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +aceg +r+er et+++W+ r +aGF+++p s+ k ak+ +r ++ + ++++e+ ++++gWk+r ++ +SaW+ PKA63144.1 581 IACEGVDRVERPETFRQWQVRCLRAGFEQLPASSVFLKAAKHGVRSYYHKDFSIDEDGRWVLQGWKGRIIIGLSAWK 657 ************************************************889*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 661 aa Download sequence |
MSTDSIFAEK IASPFHQRNY FPELPVSSFV SHGGDGSESS EIFSDLVLDL EYINNMLMEE 60 DMDEKFDMLQ GHPALEATEK PFYEIIGEKY PPSPDRPPLY SSSCSESSDG YRGCVEYQNS 120 QFSPSSSSSS STNGADGFEI KEDLFPDIFF KNLPLSQFEK GVEEAKKFLP SEDKLVVHAG 180 RVDSVEREDR RTGRTLKNRH GVDDLNFTEG RISKQSAVSF EDPAVPSEVF DMVLLCAGEK 240 FPKALNAIRE NIYQEASKNS QRAERKKSGG RKNQWKKQRE AEMVDINTLL LHCAQTVAAG 300 DSRRGYELLK KIRQHSTPHG DAPQRVAHYF ADGLEARLAG TGSEIYHSLV AKRKTAADVL 360 KAYQLYLAAC PFKKISYHFA NQTILETIEK ATRVHIVDFG IYFGFQWPVF IKLLSQRPGG 420 PPKLRITGID FPQPGFRPLE MIEETGRRLA GYAKRFGVPF EYQAVASKFE EIKIEDLCIK 480 EDEMLVVSCV LRLHNLADET VVVDCPRDKV LRTIRELNPA LFVNVVISGS YGAPFFVTRF 540 REALYHFSAL FDMLETNVPR EDAQRLLVER NLYGRFAINV IACEGVDRVE RPETFRQWQV 600 RCLRAGFEQL PASSVFLKAA KHGVRSYYHK DFSIDEDGRW VLQGWKGRII IGLSAWKPTA 660 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 0.0 | GRAS family protein |