PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62862.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family AP2
Protein Properties Length: 487aa    MW: 53661.7 Da    PI: 6.7148
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.5e-17162211155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PKA62862.1 162 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 211
                 78*******************......55************************998 PP

2AP240.47.4e-13254303154
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ + +
  PKA62862.1 254 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIQCN 303
                 89********.7******5553..2.26**********99*********98765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MVLDLNVASG GESSSTPERL LHERSEDGRM ADSGTSNSSV LNAEEYSSIA DEGSCSTRPA  60
FRFGILKDAG GGEEVEMAED EEVGYVADAA LVTRQLFPQQ AQVALDKSAA EEATASLPRH  120
QWANLSFCRT DPEATEDFHL LRPLQQQPQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI  180
WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GLDADINFNL SDYDEDLKQM GNLSKEEFVH  240
ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI  300
QCNGREAVTN FEPSIYEGEF IAKAKEDAAH NIDLNLSISP PSVCSSKSIE NPMGIQFNCS  360
PSDASHLKRI KIDHPCTIPV VQPHNIAGNP EHTQIWSNVH PTLFFANEKR GSNKKAEAGF  420
PASFPDWPWN IHGLSPFPLA ASSGFSATPH ATADPSSQPP QSPATAAAPC PFQLRLPASS  480
CHRFFQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-108AP2 family protein