PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62785.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 323aa MW: 36214.7 Da PI: 8.3704

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.3	1.7e-33	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl PKA62785.1 31 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 85 79****************************************************8 PP
2	Myb_DNA-binding	71	1.8e-22	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e+++++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ PKA62785.1 33 RLRWTVELHDRFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 84 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MFPSKKPSMN SHERPICVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK 60 TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFSDHTKDD ISFQLYIYIY ILHLKSCSRN 120 VQITEALRMQ MEVQRRLHEQ LEVQKHLQMR IEAQGKYMQS ILEKACQTLA GENAAAASSG 180 CYKPGLMMEV AGAMKDIGSP VTFPSLQDLH LFNNDHLDHL HDGFFPCTSE TLCLGPKKRP 240 NPYSSPNGKS PMIWADEELP EEASKSPVNG GLDIESMTRE VYEAKPMLSG DSAARRAQVP 300 APEMMSPMIR GGVLNQARNL SYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	5e-91	G2-like family protein