PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62772.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family BBR-BPC
Protein Properties Length: 289aa    MW: 32011.6 Da    PI: 9.7642
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind280.29.7e-8612891301
   GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.....rernlalsekkaavaerd..maflqrdkalaernkalverdnkllalllvensl 91 
                 md dg++   ++g + + a l+ nlglqlms + er +k+     r +   ++ + +   +    ++f  rd + ++       rd+  +   +  +++
  PKA62772.1   1 MDADGKMGsEHWGGFCRPAPLRGNLGLQLMSDVVERGSKPfffggRGECF-FQRECGMPEPSSmpIDF-VRDFWYHN------SRDSGRMLYGF--HGS 89 
                 89999998899**6665569*******************98886422222.33333333333344678.89*****9......88887666655..555 PP

   GAGA_bind  92 asalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskae 190
                  +++ ++++++   +++++lq+    q  ds+ e  e+  + + p++  +++a   kk++ ++++++ k++k+k+++k  ++s ++++++    r+k+ 
  PKA62772.1  90 HHHHLNNYGAILSGTCANTLQM---LQSVDSPRE--ENAAVLEDPVTP-QNDALPLKKMS-QAQSRSVKASKQKRNRKAAAVS-EESAPPL--GRRKSV 178
                 5666678888888899999999...444455444..666677777655.44444444444.4566777888888777755444.5555555..589*** PP

   GAGA_bind 191 kksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhW 289
                 kks+++v+ng++lD s +P PvC+CtG ++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrg RiagrKmS+gafkk+LekLa+eG d+s p+DLk +W
  PKA62772.1 179 KKSVGMVINGIDLDLSEMPSPVCTCTGNPHQCYRWGAGGWQSACCTTSISIYPLPMSMKRRGVRIAGRKMSHGAFKKVLEKLAGEGQDFSYPIDLKPFW 277
                 *************************************************************************************************** PP

   GAGA_bind 290 AkHGtnkfvtir 301
                 AkHGtnkfvtir
  PKA62772.1 278 AKHGTNKFVTIR 289
                 ***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDADGKMGSE HWGGFCRPAP LRGNLGLQLM SDVVERGSKP FFFGGRGECF FQRECGMPEP  60
SSMPIDFVRD FWYHNSRDSG RMLYGFHGSH HHHLNNYGAI LSGTCANTLQ MLQSVDSPRE  120
ENAAVLEDPV TPQNDALPLK KMSQAQSRSV KASKQKRNRK AAAVSEESAP PLGRRKSVKK  180
SVGMVINGID LDLSEMPSPV CTCTGNPHQC YRWGAGGWQS ACCTTSISIY PLPMSMKRRG  240
VRIAGRKMSH GAFKKVLEKL AGEGQDFSYP IDLKPFWAKH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.17e-69BBR-BPC family protein