PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 25949.3 Da PI: 7.84 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.6e-18 | 48 | 97 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g+WvAeIr+p gkr r +lg+f taeeAa a+++a++ l+g PKA62705.1 48 RYRGVRQRT-WGKWVAEIREP---GKRSRRWLGTFSTAEEAALAYDRAALILYG 97 69****999.**********9...557999*******************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MNGAPEGSSP IEQCPVPEPG SPSGAAGAAH SGRRKGRGAG VPDKGKLRYR GVRQRTWGKW 60 VAEIREPGKR SRRWLGTFST AEEAALAYDR AALILYGPRA QLNLRPSPSS SAAGSSRYSP 120 SSSSSTAALR PLLPRPAIFP FPFPFPLLPH PYPTLPDPST GYYLAAPPPL EKLQLSSSPL 180 SSAAVAAAPC FAEMNSLAAA SEASAVMETP AGPFPSMGSG GWGCDDECPE AAAAAAACLL 240 EDSDALLFDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 2e-18 | ERF family protein |