PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 456aa MW: 50551.2 Da PI: 7.345 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 282.4 | 1.3e-86 | 71 | 448 | 1 | 374 |
GRAS 1 lvelLlecAeavssgd..lelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshl 96 lv+lL+ A+av++++ ++a L +l l+s +gdp+qR+aayf+ ALa++l+ +s ++++ ++ ++ ++e+aa+ +++ +sP+++f+h+ PKA62514.1 71 LVRLLFITATAVEQNSggSAAACDSLRQLYRLVSLSGDPIQRVAAYFADALATKLLLLSSPCFHSSiRAAPS----PADEFAAFAALYCASPFFQFAHF 165 5789999*****9976225688889******************************99555555544155555....58999999*************** PP GRAS 97 taNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrle 187 taNqaI+ea+e+e +H++Dfd+++G QWp+L+q+La+++ ++p +lRiTg+g+ s+ el et++rL++fA + +++fef+ k ++ PKA62514.1 166 TANQAIMEAFEEEesfngGSLHVVDFDLTYGSQWPSLIQSLADKAtsNKPITLRITGFGR----SSGELLETEKRLSSFAGGFgNLSFEFDG---KIIS 257 ************977777778*********************999856666*********....99***************994599*9999...6777 PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286 + e++r+k++ +laVnlv+ l++l + s+ + L + sl+P+vv++ve+e +++ rfl++l+y++a+fdsl+ +p++s++r ++E PKA62514.1 258 ENWAESIRIKKNSTLAVNLVFYLQTLNNYSAIRS-----NLMRIHSLNPTVVTLVEKEGNRG-----SRFLDSLHYFAAMFDSLDDCFPAQSKQRLMIE 346 888999******************9985554444.....5*********************6.....59****************************** PP GRAS 287 rellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg...........yrveee.sgslv.lgWkdrpLvsvS 371 + lg+ei+n+v + + r e+le+W+ ++e+ GF+ ++ls++ ++qa+lll+ +++ +rv e+ +g ++ lgW+++ L++++ PKA62514.1 347 KNHLGWEIMNAVNGGDEGnKGLRYESLETWKGAMEKNGFEGLRLSSRSVSQARLLLKIKSQHCsamderrsglgFRVTERdEGKALsLGWQQQHLITAT 445 ************8755543689*********************************97544332001112222337777654444445************ PP GRAS 372 aWr 374 aWr PKA62514.1 446 AWR 448 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence |
MIHEEVGEDL LTLSLSIGGA GGSGAGGHHF EFTKKRRRSF DEEALLLQAR DRMIRAGSTR 60 PGLQSDSGLQ LVRLLFITAT AVEQNSGGSA AACDSLRQLY RLVSLSGDPI QRVAAYFADA 120 LATKLLLLSS PCFHSSIRAA PSPADEFAAF AALYCASPFF QFAHFTANQA IMEAFEEEES 180 FNGGSLHVVD FDLTYGSQWP SLIQSLADKA TSNKPITLRI TGFGRSSGEL LETEKRLSSF 240 AGGFGNLSFE FDGKIISENW AESIRIKKNS TLAVNLVFYL QTLNNYSAIR SNLMRIHSLN 300 PTVVTLVEKE GNRGSRFLDS LHYFAAMFDS LDDCFPAQSK QRLMIEKNHL GWEIMNAVNG 360 GDEGNKGLRY ESLETWKGAM EKNGFEGLRL SSRSVSQARL LLKIKSQHCS AMDERRSGLG 420 FRVTERDEGK ALSLGWQQQH LITATAWRRR SWWMID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 1e-51 | GRAS family protein |