PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62514.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 456aa    MW: 50551.2 Da    PI: 7.345
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS282.41.3e-86714481374
        GRAS   1 lvelLlecAeavssgd..lelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshl 96 
                 lv+lL+  A+av++++   ++a   L +l  l+s +gdp+qR+aayf+ ALa++l+  +s ++++  ++ ++     ++e+aa+ +++ +sP+++f+h+
  PKA62514.1  71 LVRLLFITATAVEQNSggSAAACDSLRQLYRLVSLSGDPIQRVAAYFADALATKLLLLSSPCFHSSiRAAPS----PADEFAAFAALYCASPFFQFAHF 165
                 5789999*****9976225688889******************************99555555544155555....58999999*************** PP

        GRAS  97 taNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrle 187
                 taNqaI+ea+e+e       +H++Dfd+++G QWp+L+q+La+++  ++p +lRiTg+g+    s+ el et++rL++fA  + +++fef+    k ++
  PKA62514.1 166 TANQAIMEAFEEEesfngGSLHVVDFDLTYGSQWPSLIQSLADKAtsNKPITLRITGFGR----SSGELLETEKRLSSFAGGFgNLSFEFDG---KIIS 257
                 ************977777778*********************999856666*********....99***************994599*9999...6777 PP

        GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                 +   e++r+k++ +laVnlv+ l++l + s+  +      L  + sl+P+vv++ve+e +++      rfl++l+y++a+fdsl+  +p++s++r ++E
  PKA62514.1 258 ENWAESIRIKKNSTLAVNLVFYLQTLNNYSAIRS-----NLMRIHSLNPTVVTLVEKEGNRG-----SRFLDSLHYFAAMFDSLDDCFPAQSKQRLMIE 346
                 888999******************9985554444.....5*********************6.....59****************************** PP

        GRAS 287 rellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg...........yrveee.sgslv.lgWkdrpLvsvS 371
                 +  lg+ei+n+v    +  +  r e+le+W+ ++e+ GF+ ++ls++ ++qa+lll+  +++            +rv e+ +g ++ lgW+++ L++++
  PKA62514.1 347 KNHLGWEIMNAVNGGDEGnKGLRYESLETWKGAMEKNGFEGLRLSSRSVSQARLLLKIKSQHCsamderrsglgFRVTERdEGKALsLGWQQQHLITAT 445
                 ************8755543689*********************************97544332001112222337777654444445************ PP

        GRAS 372 aWr 374
                 aWr
  PKA62514.1 446 AWR 448
                 **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MIHEEVGEDL LTLSLSIGGA GGSGAGGHHF EFTKKRRRSF DEEALLLQAR DRMIRAGSTR  60
PGLQSDSGLQ LVRLLFITAT AVEQNSGGSA AACDSLRQLY RLVSLSGDPI QRVAAYFADA  120
LATKLLLLSS PCFHSSIRAA PSPADEFAAF AALYCASPFF QFAHFTANQA IMEAFEEEES  180
FNGGSLHVVD FDLTYGSQWP SLIQSLADKA TSNKPITLRI TGFGRSSGEL LETEKRLSSF  240
AGGFGNLSFE FDGKIISENW AESIRIKKNS TLAVNLVFYL QTLNNYSAIR SNLMRIHSLN  300
PTVVTLVEKE GNRGSRFLDS LHYFAAMFDS LDDCFPAQSK QRLMIEKNHL GWEIMNAVNG  360
GDEGNKGLRY ESLETWKGAM EKNGFEGLRL SSRSVSQARL LLKIKSQHCS AMDERRSGLG  420
FRVTERDEGK ALSLGWQQQH LITATAWRRR SWWMID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-51GRAS family protein