PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62427.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 369aa MW: 41351.9 Da PI: 4.5281

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.2	4.8e-10	155	205	4	54
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 k+ rr ++NRe+A +sR+RKk++i+ Le k+ Le++ ++L l+ PKA62427.1 155 AKKRRRQMRNRESALKSRERKKEYIKDLEMKSRYLESQCRRLDYALQCCMA 205 6999**********************************9999876665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MEEGAVLDPS SDMLDCIDLD GLLQEFNDDP CFNLDLLSDL PHPSDSTSPV KASMIIDSPS 60 AESGSPDSAS FLVCFVEKFL MDDVESDAGG CVQEVGEDCV ADFFSDVFVD TSAFGKGETG 120 SPESCEASAE YSEGKEKEAS AEAGVEEEDD NDPVAKKRRR QMRNRESALK SRERKKEYIK 180 DLEMKSRYLE SQCRRLDYAL QCCMAENMAL RQSLQFRKDR RCGASAAKQE SAVLFVESLL 240 LGSLFWLVSI IVCLFLVPNL KSLNQEISSE RGLAALATDT LEPKIEKLGE DLRLELIRMR 300 RRCRGMRSRV KVLFTSSAWI ELQLRYPSLH RRTVVMSIGR LGIIYTYLTE PEQAQLVLTF 360 VSGAIHYSY

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MEEGAVLDPS SDMLDCIDLD GLLQEFNDDP CFNLDLLSDL PHPSDSTSPV KASMIIDSPS  60
AESGSPDSAS FLVCFVEKFL MDDVESDAGG CVQEVGEDCV ADFFSDVFVD TSAFGKGETG  120
SPESCEASAE YSEGKEKEAS AEAGVEEEDD NDPVAKKRRR QMRNRESALK SRERKKEYIK  180
DLEMKSRYLE SQCRRLDYAL QCCMAENMAL RQSLQFRKDR RCGASAAKQE SAVLFVESLL  240
LGSLFWLVSI IVCLFLVPNL KSLNQEISSE RGLAALATDT LEPKIEKLGE DLRLELIRMR  300
RRCRGMRSRV KVLFTSSAWI ELQLRYPSLH RRTVVMSIGR LGIIYTYLTE PEQAQLVLTF  360
VSGAIHYSY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	180	KKRRRQMRNRESALKSRERKKEYIK
2	157	181	KKRRRQMRNRESALKSRERKKEYIK
3	157	176	KRRRQMRNRESALKSRERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	1e-12	bZIP family protein