PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62419.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family G2-like
Protein Properties Length: 279aa    MW: 32013.4 Da    PI: 8.686
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.7e-32121175155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r+rWtp+LHe+Fve+v+ LGG+ekAtPk+il+lm+ +gLt++h+kSHLQkYR+
  PKA62419.1 121 KTRIRWTPDLHEKFVECVNCLGGAEKATPKEILKLMDSEGLTIYHIKSHLQKYRI 175
                 68****************************************************7 PP
2Myb_DNA-binding50.45.2e-16125174348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT++++e++v++v+ lGg    t+k I + m  +g+t +++ks++qky+
       PKA62419.1 125 RWTPDLHEKFVECVNCLGGAekaTPKEILKLMDsEGLTIYHIKSHLQKYR 174
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGFPQLEHKV SCSPLSSQPP MNSLDFACQV PPSPSWEAVE SEVKFSLSEY GNSAVSGKRQ  60
KLIYRHPQDF EVQKKVGCKL SNSWGRNPNF QHRSEKKHLS TSLNLPVTSR SPPLKASSRS  120
KTRIRWTPDL HEKFVECVNC LGGAEKATPK EILKLMDSEG LTIYHIKSHL QKYRIAKNIP  180
YASEGTWLYN LPSAVYSGMQ ITEALRIQLE VQRYLHEQLE VQRSLQIRIE AQGKQLQKMF  240
KEQMKSNKNL IEVQDLDELF PDDHQESLEG EETQTFKIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.12e-53G2-like family protein