PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | G2-like | ||||||||
Protein Properties | Length: 279aa MW: 32013.4 Da PI: 8.686 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.7 | 4.7e-32 | 121 | 175 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtp+LHe+Fve+v+ LGG+ekAtPk+il+lm+ +gLt++h+kSHLQkYR+ PKA62419.1 121 KTRIRWTPDLHEKFVECVNCLGGAEKATPKEILKLMDSEGLTIYHIKSHLQKYRI 175 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5.2e-16 | 125 | 174 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++v++v+ lGg t+k I + m +g+t +++ks++qky+ PKA62419.1 125 RWTPDLHEKFVECVNCLGGAekaTPKEILKLMDsEGLTIYHIKSHLQKYR 174 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MGFPQLEHKV SCSPLSSQPP MNSLDFACQV PPSPSWEAVE SEVKFSLSEY GNSAVSGKRQ 60 KLIYRHPQDF EVQKKVGCKL SNSWGRNPNF QHRSEKKHLS TSLNLPVTSR SPPLKASSRS 120 KTRIRWTPDL HEKFVECVNC LGGAEKATPK EILKLMDSEG LTIYHIKSHL QKYRIAKNIP 180 YASEGTWLYN LPSAVYSGMQ ITEALRIQLE VQRYLHEQLE VQRSLQIRIE AQGKQLQKMF 240 KEQMKSNKNL IEVQDLDELF PDDHQESLEG EETQTFKIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 2e-53 | G2-like family protein |