PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62257.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 280aa    MW: 30529.4 Da    PI: 5.1496
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.8e-1872120355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  PKA62257.1  72 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALAMKG 120
                 56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MSTQRSLSSA INAGRKRPDH LEEQQNPQPI IMNFSKSPPP DQPPSTTTSN TSTSPPTERR  60
GRRKLAAEPG RFLGVRRRPW GRYAAEIRDP TTKERHWLGT FDTAQEAALA YDRAALAMKG  120
TQARTNFIYT DRSSSSSFQL PPLPINPFHS LPLPAPPPSA PSPAVDDFAT EFGFVGNADS  180
RSGCLSSIIP ESCLKSSNYY NNNNSSTAAD EKQPALLPGA AIDEGISWGA SFDQEPFWEG  240
DGDEGSFSST SLWMEKSVPH DQFSDAYIDS SPSATHFSSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-32ERF family protein