PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62084.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 294aa MW: 32288.4 Da PI: 6.5116

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.9	2.6e-34	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m++kgLtl+h+kSHLQkYR+ PKA62084.1 30 KPRLRWTAELHDRFVDAVAQLGGPDKATPKTIMRIMNIKGLTLYHLKSHLQKYRM 84 79****************************************************7 PP
2	Myb_DNA-binding	71.2	1.6e-22	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav+qlGg+ t+ktI+r m+ kg+tl+++ks++qky+ PKA62084.1 32 RLRWTAELHDRFVDAVAQLGGPdkaTPKTIMRIMNiKGLTLYHLKSHLQKYR 83 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MYLKGGQTGA SLEGRSLAVD ASLVLTADPK PRLRWTAELH DRFVDAVAQL GGPDKATPKT 60 IMRIMNIKGL TLYHLKSHLQ KYRMGKQSAK DIEKNSNDAS GVVESQGSTT SSTSKHADQE 120 FNDGCNEAMR VQMELQRRLH EQLEVQRSLQ LRIDAQGKYL QSILERACSA VMGPNLTSSE 180 TDDTTRNQPP EFPERENQGC LDFSIGPFKL PLLSEATPGD CPQVKSGSRE AFPQLTECSV 240 ESCLTTISSP GGGGSMFGPK DHILKKRSRS SVFLNGEFNA ANGIYEDETW ICSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	3e-77	G2-like family protein