PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62079.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 279aa    MW: 30454.9 Da    PI: 6.7867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.7e-183786255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae+Aa a++ a+++++g
  PKA62079.1 37 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEQAACAYDIAARAMRG 86
                59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEDSTARSQL KHYPAGGPKR PSTSSSSTAG SKEGGMRYRG VRRRPWGRYA AEIRDPQSKE  60
RRWLGTFDTA EQAACAYDIA ARAMRGLKAR TNFHYPPAGS ASFAPPPAYP SGCHWPAVNA  120
SPNSTPPVKA SLHFRSFLAA TPSPPPFPPA DADNLIPSLF QGNFKPDAQT PTPGSPESFF  180
SGNCSGGLFS PEPPESGLLQ EVLHGFYPMR FTNSEKKSSE ITTKEQDEAA STSSLSTFDQ  240
MTVDGFEQPE CFPMVPEGLL QDIIQYPEFF EMVPTRLHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-24ERF family protein