PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62023.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 95aa    MW: 10596.7 Da    PI: 4.616
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73.1e-092066144
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     r +WT +  +++ +a + + ++   +W  Ia  +g g+t++++k+++
       PKA62023.1 20 RSAWTFDQNKRFEQALAVYDKDtpdRWQVIAGVVGDGKTAEEVKLHY 66
                     789*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MASSSSSSTS TMASSSSSAR SAWTFDQNKR FEQALAVYDK DTPDRWQVIA GVVGDGKTAE  60
EVKLHYEWLV EDVKMIQADL IELPKYRFAG NTDEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-25MYB_related family protein