PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA61952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 211aa MW: 24020.2 Da PI: 6.6632 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.8e-15 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+d + + G +W+t + + g+ R++k+c++rw +yl PKA61952.1 23 KGPWTPAEDMKLADFILKNGHSNWRTLPTHAGLQRCGKSCRLRWINYL 70 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.2 | 8.1e-18 | 76 | 120 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+e +++++ +lG++ W++Ia++++ gRt++++k+ w+++ PKA61952.1 76 RGNFTQEEEETIIKLHSELGNK-WSKIASCLP-GRTDNEIKNVWHTH 120 89********************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGGRRRGQGR GRAPCCEKEG VNKGPWTPAE DMKLADFILK NGHSNWRTLP THAGLQRCGK 60 SCRLRWINYL RPDIKRGNFT QEEEETIIKL HSELGNKWSK IASCLPGRTD NEIKNVWHTH 120 IKKRLAPPPI TPAKSVESRK LGSSPARSSA DLEDNYTEGL MDFEVLPVVE EGGWVFSDYA 180 LVDYWMDRSE KELDMNVGCE DGAFEEEICL W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 7e-65 | MYB family protein |