PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61920.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 342aa MW: 37488 Da PI: 6.323

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.1	5.5e-30	176	229	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl PKA61920.1 176 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 229 59*****************.******************************8 PP
2	Myb_DNA-binding	48.2	2.4e-15	178	228	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ PKA61920.1 178 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 228 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAEEADLRGL ERRASRADEG EEGRVLEWEV GLPSGDDLTP LSQPLVPPDL ASAFSIPPAE 60 LKTVLDVHRA TQHTISNLKR PQNPSSSPQV SPLKPFSFSA APQRDDDGDD PMVLEADDPK 120 EYQSVSLIER GISETSARIV RRADVGASSA AAATEEADSS ALRAENSADD QRTTKRPRLV 180 WTPQLHKRFV DVVAHLGIKN AVPKTIMQLM NVEGLTRENV ASHLQKYRLY LKRMQGISSE 240 GPSSSDYLFA STPVPHSLHD QQQPPPPTLP MPMPYAVPTM IPMPVYSMPH HHAHGVVPLT 300 NHQGGPPYSG FDAHRSYVQN NWSSGAKFGS IVPYPRVSPD DK

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAEEADLRGL ERRASRADEG EEGRVLEWEV GLPSGDDLTP LSQPLVPPDL ASAFSIPPAE  60
LKTVLDVHRA TQHTISNLKR PQNPSSSPQV SPLKPFSFSA APQRDDDGDD PMVLEADDPK  120
EYQSVSLIER GISETSARIV RRADVGASSA AAATEEADSS ALRAENSADD QRTTKRPRLV  180
WTPQLHKRFV DVVAHLGIKN AVPKTIMQLM NVEGLTRENV ASHLQKYRLY LKRMQGISSE  240
GPSSSDYLFA STPVPHSLHD QQQPPPPTLP MPMPYAVPTM IPMPVYSMPH HHAHGVVPLT  300
NHQGGPPYSG FDAHRSYVQN NWSSGAKFGS IVPYPRVSPD DK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	2e-70	G2-like family protein