PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61873.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 397aa    MW: 42881.3 Da    PI: 5.0243
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.6e-05122165453
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 +hn+ E+ R ++i +++  L++l+ +      +K + a++L++A  +I+ 
  PKA61873.1 122 THNAPEK-RTQKIGDKITALQQLVSPF-----GKTDTASVLQQAAACINI 165
                 6888886.8*****************8.....8************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MMMLGFFESE DPSEPSTHLC RPRGAASACA TAGGDRLAAM CLELGRRNPS FPTTGDRESP  60
APTSPVPFVV RRLSNTSRLA GAGAFPAGGE NSSMAAKKTR NLQNVMADSR KKRKPVEQTE  120
ITHNAPEKRT QKIGDKITAL QQLVSPFGKT DTASVLQQAA ACINILHEQI KVLSNPYFVS  180
NPSISIRVNG GEITGFLHDR GLCLVPISPA IVDLTNRQAL NSLIKDNFPC VSSQHNLFVR  240
TRPIDQERMR FHLKFVQTLP AEIAWEVPAT SPDELALVQT AEGQVQDDAL DAVYESATIE  300
LFHNVVDDDD GAYLVGTAVV VPRGGLRTPA SFQFSAQTSE SGTSFSGSAT LMSNDDDGEE  360
LGETFPIAGD LGDGVPRIRW TSWRNSVLPM AEILDDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.36e-21bHLH family protein