PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61650.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 292aa    MW: 32767 Da    PI: 7.3852
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-12177222247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ l++ +   +G g+W+ Ia+ + ++Rt+ q+ s+ qk+
       PKA61650.1 177 LPWTAEEHRLFLIGMDVHGRGDWRNIAKNFVLTRTATQVASHAQKF 222
                      69******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MHLQCLLEGG PSSHGDHQVL VSVPLPAELL LLLNILSLMD SSGRECLTEC QGEVQKKYLE  60
ALEAALPEGT DDELIDISEQ TQSADKNEVP PLTLEDMIAE GFLTQEPLMD HEDDKILMDQ  120
RMIIWGVSST TTTTSSSSSP NATKEEEEEV GRKRGRRRSP LAEAKVMKKN QRSTKGLPWT  180
AEEHRLFLIG MDVHGRGDWR NIAKNFVLTR TATQVASHAQ KFFKRQPKLT QKRRHSSSSS  240
PSPSNLISVY DLVKWDKSPA HSTKKRRKYS SSISSPVESK TVSRDHVWSH LT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264268KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-23MYB family protein