PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61218.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CPP

Protein Properties

Length: 563aa MW: 61321.7 Da PI: 7.9273

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.3	1.5e-13	101	140	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfa+g++C+ C+C +C+N+ e+ PKA61218.1 101 RKKNCNCKHSRCLKLYCECFASGVYCDG-CNCANCCNNVEN 140 689***********************.******9875 PP
2	TCR	51.6	1.9e-16	185	224	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PKA61218.1 185 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCVDCKNFE 224 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MDQGIQSASS RPSDFPPKKL VRQLDFSSAN FGGPAAPSGA GSVPVEQKQQ APPHMVLQQQ 60 QQSHVPPIPI LRPSMPMPMK TESPKAMPRP LFEVKEGTPT RKKNCNCKHS RCLKLYCECF 120 ASGVYCDGCN CANCCNNVEN EVARHEAVEA TLERNPNAFR PKIGNSPHTV RDNREDTGEV 180 ALIGKHNKGC HCKKSGCLKK YCECFQANIL CSENCKCVDC KNFEGSEERR ALFHGDHGNA 240 MTYMQQAANA ALNGAIGPPV FGSPALRKRK NPDILFGSSP KDQSLPRLQQ LAQASQLKSL 300 GPPSFSSNPV VRAANLASLG SLKVTYRPLL ADIVHSEDVK ELCRILVVVS GEAAKTASDK 360 DVQKEKLPEI EDQTESSLAS SSHDKDENQK AANDQKISPD DRLSGTHVEK MSTEAGSDLA 420 VFQKGCRPMS PGTLALMCDE EDMMFMTAQE PNPPPKFPCN QRVTEVYAEQ EKCVLMAFRE 480 SLLKLINCGT AKESRFSSMA MKADASRHHE LVTNGNGRLL ASGAVDVSQN VNAFISSSNN 540 HVTSKVGNQT LENGNIKPKL EIV

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MDQGIQSASS RPSDFPPKKL VRQLDFSSAN FGGPAAPSGA GSVPVEQKQQ APPHMVLQQQ  60
QQSHVPPIPI LRPSMPMPMK TESPKAMPRP LFEVKEGTPT RKKNCNCKHS RCLKLYCECF  120
ASGVYCDGCN CANCCNNVEN EVARHEAVEA TLERNPNAFR PKIGNSPHTV RDNREDTGEV  180
ALIGKHNKGC HCKKSGCLKK YCECFQANIL CSENCKCVDC KNFEGSEERR ALFHGDHGNA  240
MTYMQQAANA ALNGAIGPPV FGSPALRKRK NPDILFGSSP KDQSLPRLQQ LAQASQLKSL  300
GPPSFSSNPV VRAANLASLG SLKVTYRPLL ADIVHSEDVK ELCRILVVVS GEAAKTASDK  360
DVQKEKLPEI EDQTESSLAS SSHDKDENQK AANDQKISPD DRLSGTHVEK MSTEAGSDLA  420
VFQKGCRPMS PGTLALMCDE EDMMFMTAQE PNPPPKFPCN QRVTEVYAEQ EKCVLMAFRE  480
SLLKLINCGT AKESRFSSMA MKADASRHHE LVTNGNGRLL ASGAVDVSQN VNAFISSSNN  540
HVTSKVGNQT LENGNIKPKL EIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-140	CPP family protein