PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61093.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 264aa    MW: 27783 Da    PI: 8.4002
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00077165184120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 y+C +C+k+F+++  L  H 
  PKA61093.1 165 YQCVNCKKVFPSHQALGGHR 184
                 9***********99987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MEKRTCKLCF HSFASGRALG GHMRSHVAAA AAVAVTAAAA AQTALEESLR MAGSSASTEE  60
SVRSRGISLV DEASDFVAQD HESETGSSPL ATSATVKTIR QRLATLPQAE LAEPESLSTV  120
SHTTSVEEAA LNLMMLSHDS WTRAPAGKSR RSPSPATAAR ERVRYQCVNC KKVFPSHQAL  180
GGHRATRKKS RCCAAPQTNA APSGDGERKR SQSTSPTSQP PFPSPQVNSP VTAAARESFP  240
DLNLPAPMDE FAGISAASDP TQID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.16e-22C2H2 family protein