PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61033.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 474aa MW: 53158 Da PI: 4.8918

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.5	1.2e-34	22	112	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d++++e++sws+++ sf+v+d+ +f++ +Lp+yFkh+nf+SF+RQLn+YgF+k+++e+ weF++++F k++k+ll++i+ PKA61033.1 22 FLLKTYEMVDDSSTDEIVSWSSTNASFIVWDPPQFSSFLLPTYFKHNNFSSFIRQLNTYGFRKIDSER---------WEFANEEFVKDQKHLLKNIH 109 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PKA61033.1 110 RRK 112 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MEQTASTTVS VAGAGGGGPA PFLLKTYEMV DDSSTDEIVS WSSTNASFIV WDPPQFSSFL 60 LPTYFKHNNF SSFIRQLNTY GFRKIDSERW EFANEEFVKD QKHLLKNIHR RKPIHSHSNP 120 PTAAVDPDRA ALEDEIERLQ RDKVALQADL WRFKNQQSGT KIHVEDLERR LRDMEQRQAK 180 MIAFLQRAVQ NPKFVENLVR MADSSASMFH KKRRLPGVDY CAEAAENSFC DNSSSSSKPA 240 EVGYLFSLDF CDKLKLELSP AIVDGNLVSP SAHDSDEDDR SPFVSQANGG RNLTMECLPL 300 VPQNLELSDT GPSMSSRKDS LLPDMVDDDD ARISCHLNLT LASSSIHVDS SNQLSRIPSL 360 NDIDVANAAD QRATNANTGE DGCYPTGGVK KNAASVIADS NPLPMREAAP ASNQAPRRIN 420 DVFWEQFLTE RPGSLDTEEA SSTLREDTFE EQREQRMPRK GYNWRNREME QLSL

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MEQTASTTVS VAGAGGGGPA PFLLKTYEMV DDSSTDEIVS WSSTNASFIV WDPPQFSSFL  60
LPTYFKHNNF SSFIRQLNTY GFRKIDSERW EFANEEFVKD QKHLLKNIHR RKPIHSHSNP  120
PTAAVDPDRA ALEDEIERLQ RDKVALQADL WRFKNQQSGT KIHVEDLERR LRDMEQRQAK  180
MIAFLQRAVQ NPKFVENLVR MADSSASMFH KKRRLPGVDY CAEAAENSFC DNSSSSSKPA  240
EVGYLFSLDF CDKLKLELSP AIVDGNLVSP SAHDSDEDDR SPFVSQANGG RNLTMECLPL  300
VPQNLELSDT GPSMSSRKDS LLPDMVDDDD ARISCHLNLT LASSSIHVDS SNQLSRIPSL  360
NDIDVANAAD QRATNANTGE DGCYPTGGVK KNAASVIADS NPLPMREAAP ASNQAPRRIN  420
DVFWEQFLTE RPGSLDTEEA SSTLREDTFE EQREQRMPRK GYNWRNREME QLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-128	HSF family protein