PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60753.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 429aa MW: 47773.3 Da PI: 5.81

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	110.8	6.8e-35	243	297	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerFv+av+qLGGsekAtPk +l++mkv+gLt++hvkSHLQkYR+ PKA60753.1 243 RPRMRWTPELHERFVDAVNQLGGSEKATPKGVLKIMKVEGLTIYHVKSHLQKYRT 297 59****************************************************8 PP
2	Myb_DNA-binding	58.3	1.7e-18	245	296	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg t+k + + m +g+t +++ks++qky+ PKA60753.1 245 RMRWTPELHERFVDAVNQLGGSekaTPKGVLKIMKvEGLTIYHVKSHLQKYR 296 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
METCSAVSMS NSNMKQICSS GVSSVMQSSL PDVSTSSDIE LTELPNHQVS LNRVLTSNSI 60 ATYHTPFTSN SAVIRPSLSS TSGFSSNLHY IQSPTSDLPL PSVHSSHSEA IQTSASNYQT 120 EVNGISWGQE SIHDVLIYSD NMRLESNQIQ GTTIDNQIQR NTVMVSDDLA KSDEWWDLCI 180 DDWKDLLSDP VATETQQKDV CLSTEATPLN MLVHHKHAHQ SSHSGELCIV TSPPSSNNGA 240 PPRPRMRWTP ELHERFVDAV NQLGGSEKAT PKGVLKIMKV EGLTIYHVKS HLQKYRTARH 300 RPESSEGTSE KRISPLDVDL KKSGMELTEA LRLQMEVQKR LHEQLEIQRN LQLRIEEQGR 360 YLQMMFEQQC RAGLGIQRPS SSPEEKIPQS SCTSTLSPAQ NDHPLEKENG EAMEDKSELP 420 VNVEGKFSK

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

METCSAVSMS NSNMKQICSS GVSSVMQSSL PDVSTSSDIE LTELPNHQVS LNRVLTSNSI  60
ATYHTPFTSN SAVIRPSLSS TSGFSSNLHY IQSPTSDLPL PSVHSSHSEA IQTSASNYQT  120
EVNGISWGQE SIHDVLIYSD NMRLESNQIQ GTTIDNQIQR NTVMVSDDLA KSDEWWDLCI  180
DDWKDLLSDP VATETQQKDV CLSTEATPLN MLVHHKHAHQ SSHSGELCIV TSPPSSNNGA  240
PPRPRMRWTP ELHERFVDAV NQLGGSEKAT PKGVLKIMKV EGLTIYHVKS HLQKYRTARH  300
RPESSEGTSE KRISPLDVDL KKSGMELTEA LRLQMEVQKR LHEQLEIQRN LQLRIEEQGR  360
YLQMMFEQQC RAGLGIQRPS SSPEEKIPQS SCTSTLSPAQ NDHPLEKENG EAMEDKSELP  420
VNVEGKFSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-69	G2-like family protein