PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | DBB | ||||||||
Protein Properties | Length: 202aa MW: 22500.8 Da PI: 8.2257 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.7 | 9.9e-08 | 4 | 34 | 5 | 35 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 +C+ +e+ ++ lfC ++ lC+ C ++ Hk PKA60720.1 4 ICDVCESAPAVLFCAADEAALCRPCDDKVHK 34 8***************************995 PP | |||||||
2 | zf-B_box | 24.7 | 5e-08 | 52 | 86 | 2 | 36 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 e ++C+ +e ++ +fCe +++ lC +C + H g PKA60720.1 52 EVPRCDICETSPAFFFCEIDGSSLCLQCDTIVHVG 86 789**************************999955 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MRIICDVCES APAVLFCAAD EAALCRPCDD KVHKCNKLAS RHVRVGLADP SEVPRCDICE 60 TSPAFFFCEI DGSSLCLQCD TIVHVGGKRT HARYLLLRQA VQVLLLVSLI LTQGIKLKIT 120 NHFSFQTEAH LSKPVARERQ QNREGSGPPA FDANGDNHGS ANSKMFDLNA RPTRTHYQAS 180 NTQASFSFRR SFLMHDSFKM FL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-59 | DBB family protein |