PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60494.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 327aa    MW: 35732.9 Da    PI: 5.7798
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.2e-20161210255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  PKA60494.1 161 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAVAYDKAAFRLRG 210
                 59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAAALDMYNS KPFFSSDLEL MEALEPFIKG ATSSVSPSST PAISTLSSSS ALPFPFPDLS  60
LFSSPFSSYP SSSSSSSQNP IFDLCTSSMS FSPMTHAGFP SSDRLIGLTH LGPAQIQQIQ  120
EQLHLRQQQQ HHHLLSPRPQ PMKLASSAAL PAPPASKPAK LYRGVRQRHW GKWVAEIRLP  180
KNRTRLWLGT FDTAEEAAVA YDKAAFRLRG DFARLNFPHL RHDDASRPGG ELHSAVDAKL  240
QAICQNLADS QKQGVSSQPA TTPAKPADGV EDKPQVSSDG EDCSSDSSPV SGMEQLDFTE  300
APWDESESFV LKKYPSWEID WDSILSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-46ERF family protein