PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60478.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 388aa MW: 44122.2 Da PI: 7.614

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.4	1.1e-11	97	139	2	41
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 +++k+ rr+++NReAAr+sR+RKka++++Le k ++Le+e PKA60478.1 97 PSDKVLRRLAQNREAARKSRLRKKAYVQQLESsriKLAQLEQE 139 689***************************9633355555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MSCKPMELYY GHLQQNFHTM KSPISMKSSS TQFAASTRMD VYDPKHQNGV WRDSFKADSS 60 QNTCMSAIIE PDARIEDKLD ESHRDTPKKF DQETYKPSDK VLRRLAQNRE AARKSRLRKK 120 AYVQQLESSR IKLAQLEQEL EMAKQQGVYI GEHKGDPNGG FSGTINPGVT AFEMEYGHWV 180 EEQNRQLCEL RAALQAHVSD IELQMLVESC MSHYYNLFRI KEIAAKSDVF YVMSGMWKTA 240 AERFFIWIGG FRPSELLKVL TPQLDPLTEQ QLVAVCNLQQ SSQQAEDALS QGLDKLQQTL 300 AETLTSDHPL GALGVANYMG QMANAMGQLE ALVGFVNQAD HLRQQTLQQM YKILTTRQVA 360 RGLLALGDYF QRLRALSSLW AARPREPT

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MSCKPMELYY GHLQQNFHTM KSPISMKSSS TQFAASTRMD VYDPKHQNGV WRDSFKADSS  60
QNTCMSAIIE PDARIEDKLD ESHRDTPKKF DQETYKPSDK VLRRLAQNRE AARKSRLRKK  120
AYVQQLESSR IKLAQLEQEL EMAKQQGVYI GEHKGDPNGG FSGTINPGVT AFEMEYGHWV  180
EEQNRQLCEL RAALQAHVSD IELQMLVESC MSHYYNLFRI KEIAAKSDVF YVMSGMWKTA  240
AERFFIWIGG FRPSELLKVL TPQLDPLTEQ QLVAVCNLQQ SSQQAEDALS QGLDKLQQTL  300
AETLTSDHPL GALGVANYMG QMANAMGQLE ALVGFVNQAD HLRQQTLQQM YKILTTRQVA  360
RGLLALGDYF QRLRALSSLW AARPREPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.2	1e-167	bZIP family protein