PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA60476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | NF-YB | ||||||||
Protein Properties | Length: 205aa MW: 22202.6 Da PI: 7.0594 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177 | 1.8e-55 | 29 | 124 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianvsrimk+ lPan kiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGf+ yv plk+yl++yre+egek PKA60476.1 29 KEQDRFLPIANVSRIMKRSLPANVKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFDSYVVPLKTYLNRYRETEGEK 124 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MKGRKGTDPQ QLLIPTGSPQ SDNDAGLSKE QDRFLPIANV SRIMKRSLPA NVKISKDAKE 60 TVQECVSEFI SFITGEASDK CQREKRKTIN GDDLLWAMTT LGFDSYVVPL KTYLNRYRET 120 EGEKNTISRQ PQPADHDQAS LSEDGSGAAA AAAATVVDGG FYSELWSSNH NEKVGGHGLF 180 GRTAAGNHPG GRAAVPSHLR GADQW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 8e-63 | NF-YB family protein |