PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60156.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 318aa    MW: 35045.7 Da    PI: 9.843
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-1365109147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PKA60156.1  65 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 109
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVSASPTAGA CAGGAAGFCA GSRHYQDRQL HQGMMLSMTT TTAASASSED PNKKIRKPYT  60
ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKVQKNGTSE  120
HVPPPRPKRK AAHPYPQKAS KNAHSVPQPT TPFQTSSSLL EPGYALMSES SPVVRHSATS  180
GTVSSWAHGS IQPAVASYMT DVRPIGVMVV KNCSSSSGSP PRTWRNYETT DQGPPAQSLR  240
ALPDFARVYN FMGSVLDPST SGHLQKLKEL DPINVETVLL LMRNLCINLK SPDFEDHRRL  300
LSSYDTPLEQ MKSTNQLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.22e-90MYB_related family protein