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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PKA60073.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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| Family | NAC | ||||||||
| Protein Properties | Length: 324aa MW: 36722.8 Da PI: 5.1493 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 171.7 | 2.2e-53 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97
lppGfrFhPtd+elv +yLk+kv+g k+el evi+ vd+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nrat+sgyWkatgkd+++++ ++
PKA60073.1 6 LPPGFRFHPTDDELVGYYLKRKVDGLKFEL-EVIPVVDLYKFDPWELPeKsFLPKKDMEWFFFCPRDRKYPNGSRTNRATASGYWKATGKDRKIVC-ES 102
79****************************.99**************95344555788**************************************.99 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
+++gl+ktLvfy+grap g +t+Wvmheyrl
PKA60073.1 103 TTKGLRKTLVFYRGRAPGGGRTEWVMHEYRL 133
99***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 324 aa Download sequence |
MGPTSLPPGF RFHPTDDELV GYYLKRKVDG LKFELEVIPV VDLYKFDPWE LPEKSFLPKK 60 DMEWFFFCPR DRKYPNGSRT NRATASGYWK ATGKDRKIVC ESTTKGLRKT LVFYRGRAPG 120 GGRTEWVMHE YRLCEDLPQG ATAFLGAFAL CRVVKRSEHG SHHGEPKVRR PLPSATIMEL 180 PVGSQVTTIP ATEEDPFMVD VSEGILLEKD MFEQILPAQL SYSNESCLIY GISPVSSYES 240 LTEEAFSAEQ VSWNAFSSTC PSPIHCMSMN CNEESLEWNV ERCMVPRSNG TEVWNPMTYT 300 ALCRQTSGDE PNLWSPEEVL MPVS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17980.1 | 1e-85 | NAC family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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