PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59820.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 307aa MW: 31657.2 Da PI: 8.9446

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	5.1e-39	56	114	5	63
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +kcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk+k+sss PKA59820.1 56 PVKCPRCDSVNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGSRKSKRSSS 114 689****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MQDLQSVAGL RGRIFGGVGG GLGGGVGGGG SGSDHRRLRG YPIAALAGMA PHPPLPVKCP 60 RCDSVNTKFC YYNNYNLSQP RHFCKSCRRY WTKGGVLRNV PVGGGSRKSK RSSSSSSKSS 120 SKSSSAVSSK SEATAPHKDP AVPTASLSSS DSSGITAAPA STGDATASIL FNPHSSNPNL 180 TPSLDPPHPA DPATEIFSDA GGSFTGLMAA ASNIPSFLRF SFDDPTLLRL PDSPPAQPAQ 240 RPEEIRHYGL DHRTVPLELP AASGIGGIDW TPATGSGIFS LAGAAVDPAA YWSHGSWGDG 300 DPSLYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	7e-31	Dof family protein