PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59733.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family LFY
Protein Properties Length: 474aa    MW: 52121.5 Da    PI: 7.2123
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY597.43.2e-18214421386
     FLO_LFY   1 mdp.eafsaslfkwdpraaaaapparlleeaavseap.............leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdee 85 
                 mdp +afsa++ +wdpr +aa+p +++++ a vs++p              ++aa++a  ++r+le++f +yGvry+tva+i++lGft+stLv+m++ee
  PKA59733.1   1 MDPgDAFSANFLRWDPRGTAAPPCSEVVTMALVSSQPqhhpqqphepspsPATAAEIARAAARDLEDVFDGYGVRYATVARIGQLGFTASTLVGMREEE 99 
                 666366***********9998888777777766666545555555444422222333333377************************************ PP

     FLO_LFY  86 lddlmkslseifrldllvGeryGikaavraerrrlee................................eeaekkrrkllsedeetaldalsqeglsee 152
                 +dd+m++l+++fr+dllvGeryGikaavraerrrle+                                +++ ++r  lls d+ +aldalsqeglsee
  PKA59733.1 100 VDDMMTTLTHLFRWDLLVGERYGIKAAVRAERRRLEAlvfppngcpsqhhqghllssaagatglhyplsADDPRRRLMLLSPDHPNALDALSQEGLSEE 198
                 ********************************************************************766666777778******************* PP

     FLO_LFY 153 pvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse...........ededeeeeededeegsgedgeerqrehPfivtepge 240
                 pvq  +eaagsgge +g ++ +++++ +++++   a+k+++k+kk  +++ +           +ded+++ e +++++ g  + erqrehPfivtepge
  PKA59733.1 199 PVQLDREAAGSGGEAVGMRDGKGKSSLRKKKDIAAARKSRKKKKKGADQEDDgeeeerwrfagDDEDDDDAEGSESSERGV-SGERQREHPFIVTEPGE 296
                 ***************999988888864444444444444444444433333378889999885555555555555555555.55*************** PP

     FLO_LFY 241 vargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqa 339
                 var+kknGLDYLf+LyeqC+efLlqvq++akerG+kcPtkvtnqvfryakk+gasyinkPkmrhYvhCYalh+Lde as+alrr+fkergenvGawrqa
  PKA59733.1 297 VARAKKNGLDYLFHLYEQCHEFLLQVQALAKERGDKCPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHVLDEGASDALRRSFKERGENVGAWRQA 395
                 *************************************************************************************************** PP

     FLO_LFY 340 cykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
                 cykplvai+a +++d+davfnahprLsiWYvPt+Lr+LChl+rs+++
  PKA59733.1 396 CYKPLVAISAAHAFDVDAVFNAHPRLSIWYVPTRLRHLCHLARSATA 442
                 *******************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MDPGDAFSAN FLRWDPRGTA APPCSEVVTM ALVSSQPQHH PQQPHEPSPS PATAAEIARA  60
AARDLEDVFD GYGVRYATVA RIGQLGFTAS TLVGMREEEV DDMMTTLTHL FRWDLLVGER  120
YGIKAAVRAE RRRLEALVFP PNGCPSQHHQ GHLLSSAAGA TGLHYPLSAD DPRRRLMLLS  180
PDHPNALDAL SQEGLSEEPV QLDREAAGSG GEAVGMRDGK GKSSLRKKKD IAAARKSRKK  240
KKKGADQEDD GEEEERWRFA GDDEDDDDAE GSESSERGVS GERQREHPFI VTEPGEVARA  300
KKNGLDYLFH LYEQCHEFLL QVQALAKERG DKCPTKVTNQ VFRYAKKVGA SYINKPKMRH  360
YVHCYALHVL DEGASDALRR SFKERGENVG AWRQACYKPL VAISAAHAFD VDAVFNAHPR  420
LSIWYVPTRL RHLCHLARSA TASSLPAACP GGSATSQHAA GLPDAGHGLR RPMF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226243RKKKDIAAARKSRKKKKK
2227244RKKKDIAAARKSRKKKKK
3235243RKSRKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-95LFY family protein