PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59656.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 300aa    MW: 34520.5 Da    PI: 6.2641
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00045160184123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 + C+ C+k ++  ++++ H+++  H
  PKA59656.1 160 FYCNLCNKQYKLAMEFEAHLSSydH 184
                 79*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEGKRSNEIE ATCDQNVRQN VEEAHLYSYI EDSGEDFRLP IDHRPIENLD TDNLEQASLD  60
TQLPSSNIGY RLLQKMGWKG KGLGKDEQGI VEPIKAGIRD PRLGVGKQEQ DDFFTSEENV  120
QRRKLDVELE ETEELTKKRE VIAEREQKIQ TEVKEIKKVF YCNLCNKQYK LAMEFEAHLS  180
SYDHNHRKRF KEMREMHGGS SRDDRQRREQ LRQEKEIAKF AQMADAHRRQ HGHIQEQSGL  240
SVDSGAESGN LLVDNDKRQT LKFGFTSKLG SKNPPGNLAK KPKMASKVAS VFGNDSDEEL