PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA59197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 127aa MW: 14205.8 Da PI: 5.4058 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.7e-20 | 10 | 61 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrd s + +r++lg+f taeeAa+a+++a+ +++g PKA59197.1 10 TRYRGVRRRP-WGKFAAEIRDSSR---QgARIWLGTFSTAEEAARAYDRAAYRMRG 61 68********.**********422...24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MKKTDGGGDT RYRGVRRRPW GKFAAEIRDS SRQGARIWLG TFSTAEEAAR AYDRAAYRMR 60 GSLAVLNFPE EAHLYAAEAS AVSTSSAAGE GRREVIELEY LDEKVLEDML LDSGEKEEEK 120 EKEKGRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-27 | ERF family protein |