PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59056.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CPP

Protein Properties

Length: 552aa MW: 60325.9 Da PI: 8.1488

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	40.2	6.8e-13	76	115	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnC++skClk+YCeCfa+g++C+ C+C++C+N+ e+ PKA59056.1 76 KHKQCNCRNSKCLKLYCECFASGVYCNG-CNCSNCCNNAEN 115 789***********************.******9875 PP
2	TCR	51.1	2.7e-16	160	198	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks Clk+YCeCf+a+ Cse+CkC dC+N PKA59056.1 160 KHNKGCHCKKSGCLKRYCECFQANILCSENCKCVDCRNF 198 589**********************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MESGAASIPQ DISQKKLVRQ LDFTGTLFRV PIVTASPASA ARELSAPSEP AVPVSQCSIS 60 APMMSFYEVK DATPKKHKQC NCRNSKCLKL YCECFASGVY CNGCNCSNCC NNAENEAVRR 120 EAIESTLERN PNAFRPKIAN SPQPVQDSKV EVGELPFVVK HNKGCHCKKS GCLKRYCECF 180 QANILCSENC KCVDCRNFDG SEDRRALVHS ESGNTQVYIQ QAANAAINGA IGSSGYGSPA 240 SKKRKHQEFL HSTSAKDQLD HGLSQFPEIN CAKASGHTAL SSRAAAQTNG HVIHSSKLTY 300 RSPLAGIIQQ EHVKIFCKVL VAQSGRQTTT STGRRLPEEK VIEREDKDKE DTKGQNGKAV 360 QMSQRESATA HSNETNASIH VPGAVSAGIE KGARPMSPGT MALMCDEPDT IFLTLDNCRS 420 PGFPRKENFT EVYAQQERFV LMKLRDSLHD LANCGRMKEE NFNLISMIAE TPRHEASVIN 480 QAKSCSDVPA HGKDEYIHQA SISKDIIINK AAGLNRQELV SEELNFKPSH SEHQIHAKST 540 GASPGHNKTQ ST

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MESGAASIPQ DISQKKLVRQ LDFTGTLFRV PIVTASPASA ARELSAPSEP AVPVSQCSIS  60
APMMSFYEVK DATPKKHKQC NCRNSKCLKL YCECFASGVY CNGCNCSNCC NNAENEAVRR  120
EAIESTLERN PNAFRPKIAN SPQPVQDSKV EVGELPFVVK HNKGCHCKKS GCLKRYCECF  180
QANILCSENC KCVDCRNFDG SEDRRALVHS ESGNTQVYIQ QAANAAINGA IGSSGYGSPA  240
SKKRKHQEFL HSTSAKDQLD HGLSQFPEIN CAKASGHTAL SSRAAAQTNG HVIHSSKLTY  300
RSPLAGIIQQ EHVKIFCKVL VAQSGRQTTT STGRRLPEEK VIEREDKDKE DTKGQNGKAV  360
QMSQRESATA HSNETNASIH VPGAVSAGIE KGARPMSPGT MALMCDEPDT IFLTLDNCRS  420
PGFPRKENFT EVYAQQERFV LMKLRDSLHD LANCGRMKEE NFNLISMIAE TPRHEASVIN  480
QAKSCSDVPA HGKDEYIHQA SISKDIIINK AAGLNRQELV SEELNFKPSH SEHQIHAKST  540
GASPGHNKTQ ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	3e-93	CPP family protein